RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 SRSF10O75494 262 aaKnown RBP6.62□□□□□ -1.35
CDH13-203ENST00000431540 GATBO75879 557 aaKnown RBP6.62□□□□□ -1.35
CDH13-203ENST00000431540 MPIG6BO95866 241 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 CYB5AP00167 134 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 CST1P01037 141 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 IGLV1-47P01700 117 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 TTRP02766 147 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 CSN2P05814 226 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 IGLL1P15814 213 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 CCL3L1P16619 93 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 MYCNOSP40205 109 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 RAB13P51153 203 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 GMFBP60983 142 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 ESRRGP62508 458 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 ACTA2P62736 377 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 ACTG2P63267 376 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 ACTC1P68032 377 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 ACTA1P68133 377 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 TMED1Q13445 227 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 ZNF273Q14593 569 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 KLHL22Q53GT1 634 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 DEFB121Q5J5C9 76 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 HEPN1Q6WQI6 88 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 AQP12AQ8IXF9 295 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 DYNAPQ8N1N2 210 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 OR14K1Q8NGZ2 314 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 CHPT1Q8WUD6 406 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 PP6455Q8WZ26 134 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 ASB9Q96DX5 294 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 CEP19Q96LK0 163 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 GON7Q9BXV9 100 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 GAL3ST2Q9H3Q3 398 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 MED20Q9H944 212 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 ELL3Q9HB65 397 aaPredicted RBP6.62□□□□□ -1.35
CDH13-203ENST00000431540 PAPOLBQ9NRJ5 636 aaKnown RBP6.62□□□□□ -1.35
CDH13-203ENST00000431540 H2AFY2Q9P0M6 372 aaPredicted RBP6.62□□□□□ -1.35
CDH13-203ENST00000431540 ARL2BPQ9Y2Y0 163 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 R4GMQ9 66 aa6.62□□□□□ -1.35
CDH13-203ENST00000431540 A0A1B0GTI1 187 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 FAM90A18PA6NE21 464 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 FAM90A16PA6NEW6 464 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 FAM90A20PA6NIJ5 464 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 FAM90A9PA6NNJ1 464 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 FAM90A12PA8MX19 464 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 FAM90A5PA8MXJ8 464 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 LOC110117498-PIK3R3F6TDL0 507 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 C3orf84H3BNL1 204 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 SULT1C4O75897 302 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 SOX14O95416 240 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 FAM107AO95990 144 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 PRB2P02812 416 aaPredicted RBP6.61□□□□□ -1.35
CDH13-203ENST00000431540 FAM90A15PP0C7V4 464 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 FAM90A13PP0C7W8 464 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 FAM90A14PP0C7W9 464 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 FAM90A24PP0C7X0 464 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 FAM106CPP0CH98 169 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 COX7A1P24310 79 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 MSX2P35548 267 aaPredicted RBP6.61□□□□□ -1.35
CDH13-203ENST00000431540 MNDAP41218 407 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 EFNB1P98172 346 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 COL10A1Q03692 680 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 SLC34A1Q06495 639 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 CD69Q07108 199 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 ZNF124Q15973 351 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 NXNL2Q5VZ03 156 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 KCTD20Q7Z5Y7 419 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 OSR2Q8N2R0 312 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 ZNF676Q8N7Q3 588 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 ASCC1Q8N9N2 400 aaKnown RBP6.61□□□□□ -1.35
CDH13-203ENST00000431540 CHST4Q8NCG5 386 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 OR4M1Q8NGD0 313 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 OTULINQ96BN8 352 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 MYCBPQ99417 103 aaPredicted RBP6.61□□□□□ -1.35
CDH13-203ENST00000431540 CHCHD6Q9BRQ6 235 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 CHID1Q9BWS9 393 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 INPP5EQ9NRR6 644 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 CLN6Q9NWW5 311 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 MTCH1Q9NZJ7 389 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 ENOPH1Q9UHY7 261 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 OR52A1Q9UKL2 312 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 SIRT4Q9Y6E7 314 aaPredicted RBP6.61□□□□□ -1.35
CDH13-203ENST00000431540 U3KQV3 271 aa6.61□□□□□ -1.35
CDH13-203ENST00000431540 TRGV10A0A0A0MS01 117 aa6.6□□□□□ -1.35
CDH13-203ENST00000431540 TRBV2A0A0J9YWF9 115 aa6.6□□□□□ -1.35
CDH13-203ENST00000431540 LY6LH3BQJ8 138 aa6.6□□□□□ -1.35
CDH13-203ENST00000431540 PSMD9O00233 223 aa6.6□□□□□ -1.35
CDH13-203ENST00000431540 GNGT2O14610 69 aa6.6□□□□□ -1.35
CDH13-203ENST00000431540 SH2D1BO14796 132 aa6.6□□□□□ -1.35
CDH13-203ENST00000431540 FGF16O43320 207 aa6.6□□□□□ -1.35
CDH13-203ENST00000431540 THBS3P49746 956 aa6.6□□□□□ -1.35
CDH13-203ENST00000431540 RBP2P50120 134 aa6.6□□□□□ -1.35
CDH13-203ENST00000431540 CRISP1P54107 249 aa6.6□□□□□ -1.35
CDH13-203ENST00000431540 ATP1B3P54709 279 aa6.6□□□□□ -1.35
CDH13-203ENST00000431540 EDDM3BP56851 147 aa6.6□□□□□ -1.35
CDH13-203ENST00000431540 RPS7P62081 194 aaKnown RBP6.6□□□□□ -1.35
CDH13-203ENST00000431540 PAX5Q02548 391 aa6.6□□□□□ -1.35
CDH13-203ENST00000431540 PRB3Q04118 309 aaPredicted RBP6.6□□□□□ -1.35
CDH13-203ENST00000431540 DYNC1I2Q13409 638 aaKnown RBP6.6□□□□□ -1.35
CDH13-203ENST00000431540 APOFQ13790 326 aa6.6□□□□□ -1.35
CDH13-203ENST00000431540 HABP2Q14520 560 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms