RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 ST13P4Q8IZP2 240 aaPredicted RBP1.03□□□□□ -2.24
CDC40-204ENST00000431461 ZCCHC24Q8N2G6 241 aaKnown RBP1.03□□□□□ -2.24
CDC40-204ENST00000431461 LY6G5BQ8NDX9 201 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 OR8K1Q8NGG5 319 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 OR4C13Q8NGP0 309 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 ACTL9Q8TC94 416 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 NELFBQ8WX92 580 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 TFGQ92734 400 aaPredicted RBP1.03□□□□□ -2.24
CDC40-204ENST00000431461 ZNF396Q96N95 335 aaPredicted RBP1.03□□□□□ -2.24
CDC40-204ENST00000431461 PITX2Q99697 317 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 CIB1Q99828 191 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 GABRG3Q99928 467 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 COPS4Q9BT78 406 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 PLA2G12AQ9BZM1 189 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 BCL2L14Q9BZR8 327 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 PLEKHA1Q9HB21 404 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 TMEM100Q9NV29 134 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 SDHAF2Q9NX18 166 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 ZNF586Q9NXT0 402 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 ZNF230Q9UIE0 474 aaPredicted RBP1.03□□□□□ -2.24
CDC40-204ENST00000431461 FADS3Q9Y5Q0 445 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 KPTNQ9Y664 436 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 R4GN34 69 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 NOS1P29475 1434 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 SSH2Q76I76 1423 aa1.03□□□□□ -2.24
CDC40-204ENST00000431461 TSPOAP1O95153 1857 aa1.03□□□□□ -2.25
CDC40-204ENST00000431461 C2orf16Q68DN1 1984 aa1.03□□□□□ -2.25
CDC40-204ENST00000431461 TRAV8-7A0A075B6U6 113 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 IGHV3-43A0A0B4J1X8 118 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 LOC389332A0A1B0GUA5 103 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 ZNF878C9JN71 531 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 H3BQ85 93 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 J3QRE1 110 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 K7EM74 188 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 RFXANKO14593 260 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 SEC16AO15027 2179 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 CRXO43186 299 aaPredicted RBP1.02□□□□□ -2.25
CDC40-204ENST00000431461 SPOPO43791 374 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 ENTPD6O75354 484 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 CDS2O95674 445 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 IGKV1-39P01597 117 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 IGKV1D-39P04432 117 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 CCDC172P0C7W6 258 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 HRES1P13985 223 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 CCNOP22674 350 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 HTR2CP28335 458 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 P2RY2P41231 377 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 RANBP1P43487 201 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 FOXA1P55317 472 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 ZNF141Q15928 474 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 TNXAQ16473 311 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 PYDC2Q56P42 97 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 LDLRAD2Q5SZI1 272 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 LIN9Q5TKA1 542 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 ZNF660Q6AZW8 331 aaPredicted RBP1.02□□□□□ -2.25
CDC40-204ENST00000431461 TMEM144Q7Z5S9 345 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 LINC00596Q86U02 117 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 RBM45Q8IUH3 476 aaKnown RBP1.02□□□□□ -2.25
CDC40-204ENST00000431461 SYS1Q8N2H4 156 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 ZFP62Q8NB50 900 aaPredicted RBP1.02□□□□□ -2.25
CDC40-204ENST00000431461 NDNFQ8TB73 568 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 LGALS14Q8TCE9 139 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 ITLN2Q8WWU7 325 aaPredicted RBP1.02□□□□□ -2.25
CDC40-204ENST00000431461 C22orf15Q8WYQ4 148 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 CDKL2Q92772 493 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 MSANTD3Q96H12 275 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 TRIB3Q96RU7 358 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 APOL4Q9BPW4 351 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 NXF2Q9GZY0 626 aaKnown RBP1.02□□□□□ -2.25
CDC40-204ENST00000431461 TXNIPQ9H3M7 391 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 FBXO44Q9H4M3 255 aa1.02□□□□□ -2.25
CDC40-204ENST00000431461 LOXHD1Q8IVV2 1947 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 RPRD2Q5VT52 1461 aaKnown RBP1.01□□□□□ -2.25
CDC40-204ENST00000431461 KIF27Q86VH2 1401 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 POLR3AO14802 1390 aaPredicted RBP1.01□□□□□ -2.25
CDC40-204ENST00000431461 USP42Q9H9J4 1324 aaKnown RBP1.01□□□□□ -2.25
CDC40-204ENST00000431461 A0A1W2PRG6 482 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 PGPA6NDG6 321 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 F5H5P2 479 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 I3L4J1 428 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 GYG2O15488 501 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 AQP9O43315 295 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 PSIP1O75475 530 aaKnown RBP1.01□□□□□ -2.25
CDC40-204ENST00000431461 POP7O75817 140 aaKnown RBP1.01□□□□□ -2.25
CDC40-204ENST00000431461 CPSF4O95639 269 aaKnown RBP1.01□□□□□ -2.25
CDC40-204ENST00000431461 GPR75O95800 540 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 PTTG1O95997 202 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 APOA1P02647 267 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 RLN2P04090 185 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 IVLP07476 585 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 SEC11BP0C7V7 166 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 GIMD1P0DJR0 217 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 SLC2A1P11166 492 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 GTF2F2P13984 249 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 ZNF708P17019 499 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 TAC1P20366 129 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 PTNP21246 168 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 CD9P21926 228 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 GTF2H1P32780 548 aa1.01□□□□□ -2.25
CDC40-204ENST00000431461 UGT2B10P36537 528 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms