RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 PLA2G5P39877 138 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 RBFOX1Q9NWB1 397 aaKnown RBP11.3□□□□□ -0.6
PTCH1-207ENST00000429896 SLC25A53Q5H9E4 307 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 ADAM5Q6NVV9 412 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 PELI1Q96FA3 418 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 KCNK17Q96T54 332 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 MRM2Q9UI43 246 aaKnown RBP11.3□□□□□ -0.6
PTCH1-207ENST00000429896 ST3GAL6Q9Y274 331 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 IGHV3-13P01766 116 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 IGHV3-7P01780 117 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 SLC25A47Q6Q0C1 308 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 LCN15Q6UWW0 184 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 TFAP2EQ6VUC0 442 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 Q6ZRG5 221 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 MRPS24Q96EL2 167 aaKnown RBP11.3□□□□□ -0.6
PTCH1-207ENST00000429896 DHRS9Q9BPW9 319 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 ZMIZ1Q9ULJ6 1067 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 OR5B21A6NL26 309 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 OR2F2O95006 317 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 OR10A3P58181 314 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 FABP5Q01469 135 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 TAGLNQ01995 201 aaKnown RBP11.3□□□□□ -0.6
PTCH1-207ENST00000429896 TMEM268Q5VZI3 342 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 MOB3BQ86TA1 216 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 TAF9BQ9HBM6 251 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 TUBD1Q9UJT1 453 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 IGLV3-32A0A0A0MS00 114 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 OPN1MWP04001 364 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 OPN1MW2P0DN77 364 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 OPN1MW3P0DN78 364 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 PHYHD1Q5SRE7 291 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 SKA3Q8IX90 412 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 RNF133Q8WVZ7 376 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 C11orf54Q9H0W9 315 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-207ENST00000429896 CLDN18P56856 261 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 ZNF835Q9Y2P0 537 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 SH2D7A6NKC9 451 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-207ENST00000429896 K7EQM0 130 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 ZNHIT1O43257 154 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 TBPP20226 339 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 PSG4Q00888 419 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 VWA1Q6PCB0 445 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 SLC16A12Q6ZSM3 486 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 PXT1Q8NFP0 134 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 KIRREL1Q96J84 757 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 A1L4Q6 167 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 ACKR3P25106 362 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 LHX2P50458 406 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 DBPQ10586 325 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-207ENST00000429896 Q6ZT83 130 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 SVBPQ8N300 66 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 SLC35E1Q96K37 410 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 MAGT1Q9H0U3 335 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 RNF115Q9Y4L5 304 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 CSAG2Q9Y5P2 127 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 ZNF85Q03923 595 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 RIPPLY2Q5TAB7 128 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 OR4F5Q8NH21 305 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 NANPQ8TBE9 248 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 OR4F4Q96R69 305 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 CISD1Q9NZ45 108 aaKnown RBP11.29□□□□□ -0.6
PTCH1-207ENST00000429896 NPTNQ9Y639 398 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 DTYMKP23919 212 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 EGR4Q05215 589 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 SPINK9Q5DT21 86 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 LPCAT3Q6P1A2 487 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 OR5H6Q8NGV6 325 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 GON7Q9BXV9 100 aa11.29□□□□□ -0.6
PTCH1-207ENST00000429896 DEFB108AA8MXU0 73 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 LINC01560Q8TB33 94 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 FBXW5Q969U6 566 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 SLC25A6P12236 298 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 C4orf17Q53FE4 359 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 APH1BQ8WW43 257 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 ZNF275Q9NSD4 429 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-207ENST00000429896 ALPK3Q96L96 1907 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 TRGV10A0A0A0MS01 117 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 A0A0D9SG52 128 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 ERVH48-1M5A8F1 160 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 OR7C2O60412 319 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 TCRBP04435 133 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 TRAPPC2P0DI81 140 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 TRAPPC2BP0DI82 140 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 CSN1S1P47710 185 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 UCP2P55851 309 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 ASAH1Q13510 395 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 TAF9Q16594 264 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 RFPL4BQ6ZWI9 263 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 KCNRGQ8N5I3 272 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 TMEM54Q969K7 222 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 PLEKHF2Q9H8W4 249 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 SLC2A8Q9NY64 477 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 GOLT1BQ9Y3E0 138 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 LRRC3CA6NJW4 275 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 ANGPTL7O43827 346 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 IGHMP01871 453 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 RNF224P0DH78 156 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 MGMTP16455 207 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 PSMB1P20618 241 aaKnown RBP11.28□□□□□ -0.6
PTCH1-207ENST00000429896 SNRPNP63162 240 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms