RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 F8VWA3 439 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 CYB5AP00167 134 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 VDAC2P45880 294 aaPredicted RBP11.98□□□□□ -0.49
MSH5-208ENST00000429846 RBP2P50120 134 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 ATP1B3P54709 279 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 ZNF91Q05481 1191 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 TMED1Q13445 227 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 EDDM3AQ14507 147 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 ZNF146Q15072 292 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 GRK1Q15835 563 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 LDLRAD2Q5SZI1 272 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 C16orf82Q7Z2V1 217 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 FAM220AQ7Z4H9 259 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 LYG1Q8N1E2 194 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 NDNFQ8TB73 568 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 AKR1E2Q96JD6 320 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 CITED2Q99967 270 aaPredicted RBP11.98□□□□□ -0.49
MSH5-208ENST00000429846 CLEC7AQ9BXN2 247 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 MMP28Q9H239 520 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 TMEM133Q9H2Q1 129 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 HILPDAQ9Y5L2 63 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 LOC107986453A0A1B0GWG9 222 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 MEX3AA1L020 520 aaKnown RBP11.97□□□□□ -0.49
MSH5-208ENST00000429846 ADARB2-AS1A8MUL3 147 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 FAM90A22PA8MWA6 464 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 MGST3O14880 152 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 FCGR1AP12314 374 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 GABRR1P24046 479 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 FASP25445 335 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 HTR1DP28221 377 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 ERP29P30040 261 aaKnown RBP11.97□□□□□ -0.49
MSH5-208ENST00000429846 CDC42P60953 191 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 SLC34A1Q06495 639 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 FAM58AQ8N1B3 248 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 OR10H4Q8NGA5 316 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 OR8J1Q8NGP2 316 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 RFKQ969G6 155 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 NECAP2Q9NVZ3 263 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.97□□□□□ -0.49
MSH5-208ENST00000429846 GLS2Q9UI32 602 aa11.97□□□□□ -0.49
MSH5-208ENST00000429846 UBE2J1Q9Y385 318 aaPredicted RBP11.97□□□□□ -0.49
MSH5-208ENST00000429846 PSPNO60542 156 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 IGHA1P01876 353 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 PRB2P02812 416 aaPredicted RBP11.96□□□□□ -0.49
MSH5-208ENST00000429846 PRKACBP22694 351 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 ATP6V1E1P36543 226 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 ARHGDIBP52566 201 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 P2RX3P56373 397 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 ISL1P61371 349 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 OXLD1Q5BKU9 147 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 OR52W1Q6IF63 320 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 UTS2BQ765I0 119 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 TRAPPC6BQ86SZ2 158 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 TPRX1Q8N7U7 411 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 OR52N4Q8NGI2 321 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 MRAPQ8TCY5 172 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 SGCDQ92629 289 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 CIB1Q99828 191 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 CHST6Q9GZX3 395 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 GAL3ST2Q9H3Q3 398 aa11.96□□□□□ -0.49
MSH5-208ENST00000429846 RBFOX1Q9NWB1 397 aaKnown RBP11.96□□□□□ -0.49
MSH5-208ENST00000429846 FUOMA2VDF0 154 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 H3BSH0 61 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 ENTPD6O75354 484 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 INMTO95050 263 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 POU3F4P49335 361 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 LOXL3P58215 753 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 BLCAPP62952 87 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 TMEM244Q5VVB8 128 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 LHFPL2Q6ZUX7 228 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 RTN4RL2Q86UN3 420 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 PRSS35Q8N3Z0 413 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 OR4P4Q8NGL7 312 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 ZNF596Q8TC21 504 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 BCAS4Q8TDM0 211 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 PHF21AQ96BD5 680 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 SPSB1Q96BD6 273 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 OR5M11Q96RB7 305 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 GABARAPL3Q9BY60 117 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 LIN7BQ9HAP6 207 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 IL36RNQ9UBH0 155 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 GNG8Q9UK08 70 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 AP4S1Q9Y587 144 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 PCDHGB5Q9Y5G0 923 aa11.95□□□□□ -0.5
MSH5-208ENST00000429846 TRGV10A0A0A0MS01 117 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 APOL3O95236 402 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 ISG15P05161 165 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 PRKACAP17612 351 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 BCL3P20749 454 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 BRS3P32247 399 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 KIR3DL2P43630 455 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 OR3A1P47881 315 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 NPBWR2P48146 333 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 MTCP1P56278 107 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 CD83Q01151 205 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 BDH1Q02338 343 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 KCTD20Q7Z5Y7 419 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 CAPSLQ8WWF8 208 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 CREB3L1Q96BA8 519 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 OPALINQ96PE5 141 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms