RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 H0YIZ8 118 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 DNASE2O00115 360 aaPredicted RBP7.07□□□□□ -1.28
HPS4-205ENST00000429411 SGCEO43556 437 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 HPNP05981 417 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 SFTA3P0C7M3 94 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 ANOS1P23352 680 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 GCH1P30793 250 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 PRRX1P54821 245 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 RPS18P62269 152 aaKnown RBP7.07□□□□□ -1.28
HPS4-205ENST00000429411 PLPPR5Q32ZL2 321 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 SLC16A14Q7RTX9 510 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 FBXL14Q8N1E6 418 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 ZNF837Q96EG3 531 aaPredicted RBP7.07□□□□□ -1.28
HPS4-205ENST00000429411 ZNF285Q96NJ3 590 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 METTL9Q9H1A3 318 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 UQCC1Q9NVA1 299 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 SLC7A11Q9UPY5 501 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 URGCP-MRPS24S4R325 110 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 LOC400499M0QZD8 3231 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 AKAP13Q12802 2813 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 FER1L5A0AVI2 2057 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 A0A0A6YYD4 124 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 NSG1A0A0A6YYJ2 146 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 H3BP45 60 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 DHHO43323 396 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 CXCL13O43927 109 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 CD74P04233 296 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 CCL3P10147 92 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 TLE1Q04724 770 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 GNMTQ14749 295 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 FAM166AQ6J272 317 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 RHBDD2Q6NTF9 364 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 TMEM182Q6ZP80 229 aaPredicted RBP7.06□□□□□ -1.28
HPS4-205ENST00000429411 TIPARPQ7Z3E1 657 aaKnown RBP7.06□□□□□ -1.28
HPS4-205ENST00000429411 ARRDC1Q8N5I2 433 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 RTN4IP1Q8WWV3 396 aaPredicted RBP7.06□□□□□ -1.28
HPS4-205ENST00000429411 UTP23Q9BRU9 249 aaKnown RBP7.06□□□□□ -1.28
HPS4-205ENST00000429411 NAA11Q9BSU3 229 aaPredicted RBP7.06□□□□□ -1.28
HPS4-205ENST00000429411 COL12A1Q99715 3063 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 WIPF3A6NGB9 483 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 RNASEK-C17orf49H0YIS7 233 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 P04436 131 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 CD79AP11912 226 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 MUC1P15941 1255 aaPredicted RBP7.06□□□□□ -1.28
HPS4-205ENST00000429411 FHITP49789 147 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 RAB5BP61020 215 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 GRB2P62993 217 aaKnown RBP7.06□□□□□ -1.28
HPS4-205ENST00000429411 PIGYQ3MUY2 71 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 ACTBL2Q562R1 376 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 AVPI1Q5T686 147 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 AAED1Q7RTV5 226 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 HOGA1Q86XE5 327 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 OR5AS1Q8N127 324 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 PIGQQ9BRB3 760 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 PECRQ9BY49 303 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 SLC26A1Q9H2B4 701 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 A0A1B0GTI1 187 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 XKRY2A2RUG3 117 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 DHRS7CA6NNS2 312 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 C1orf196B1AJZ1 125 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 TRAF3IP2O43734 574 aaPredicted RBP7.06□□□□□ -1.28
HPS4-205ENST00000429411 IGHEP01854 428 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 ISG15P05161 165 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 OR5AC1P0C628 307 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 PGA4P0DJD7 388 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 PGA3P0DJD8 388 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 CCL4P13236 92 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 FPR2P25090 351 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 TMEM33P57088 247 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 PJVKQ0ZLH3 352 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 UBE2V2Q15819 145 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 GGNBP1Q5YKI7 109 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 PRSS54Q6PEW0 395 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 TFAP2EQ6VUC0 442 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 RPS19BP1Q86WX3 136 aaKnown RBP7.06□□□□□ -1.28
HPS4-205ENST00000429411 EMG1Q92979 244 aaKnown RBP7.06□□□□□ -1.28
HPS4-205ENST00000429411 FN3KRPQ9HA64 309 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 KCNJ16Q9NPI9 418 aa7.06□□□□□ -1.28
HPS4-205ENST00000429411 RCL1Q9Y2P8 373 aaKnown RBP7.06□□□□□ -1.28
HPS4-205ENST00000429411 HSPA12AO43301 675 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 RBMXL2O75526 392 aaKnown RBP7.05□□□□□ -1.28
HPS4-205ENST00000429411 ONECUT2O95948 504 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 CD8AP01732 235 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 ARG1P05089 322 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 IFI6P09912 130 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 SPP1P10451 314 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 COX5BP10606 129 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 HNF1AP20823 631 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 GDF1P27539 372 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 P2RY4P51582 365 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 SNRPEP62304 92 aaKnown RBP7.05□□□□□ -1.28
HPS4-205ENST00000429411 ECH1Q13011 328 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 SNAI3Q3KNW1 292 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 MIDNQ504T8 468 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 SLC25A26Q70HW3 274 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 WDR5BQ86VZ2 330 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 ZNF695Q8IW36 515 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 PLPP5Q8NEB5 264 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 OR11L1Q8NGX0 322 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 OPN3Q9H1Y3 402 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms