RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 SLITRK2Q9H156 845 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 OR51J1Q9H342 316 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 TMEM100Q9NV29 134 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 HSPB11Q9Y547 144 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 DOCK11Q5JSL3 2073 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 TRAV39A0A0B4J263 110 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 IQCF6A8MYZ5 107 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 SOCS1O15524 211 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 HTR3BO95264 441 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 RAF1P04049 648 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 SELLP14151 372 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 EGR1P18146 543 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 FSTP19883 344 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 GABRR1P24046 479 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 RBP2P50120 134 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 ZNF81P51508 661 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 ZP1P60852 638 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 GUCA2AQ02747 115 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 TAF9Q16594 264 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 CEACAM21Q3KPI0 293 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 FAM166AQ6J272 317 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 BTN2A1Q7KYR7 527 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 CDH24Q86UP0 819 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 C11orf53Q8IXP5 236 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 MUC15Q8N387 334 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 BPIFB2Q8N4F0 458 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 MAFIPQ8WZ33 124 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 NARFLQ9H6Q4 476 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 RANBP3Q9H6Z4 567 aaPredicted RBP8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 MRPL15Q9P015 296 aaKnown RBP8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 MALRD1Q5VYJ5 2156 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 YLPM1P49750 1951 aaKnown RBP8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 PLSCR5A0PG75 271 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 PQLC2LA1A4F0 135 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 SLC17A2O00624 439 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 GEMIN2O14893 280 aaKnown RBP8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 ICMTO60725 284 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 GIFP27352 417 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 VEGFCP49767 419 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 SORDQ00796 357 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 IKZF1Q13422 519 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 RAB11BQ15907 218 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 ZNF672Q499Z4 452 aaPredicted RBP8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 BEX5Q5H9J7 111 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 MBNL2Q5VZF2 373 aaKnown RBP8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 PP6455Q8WZ26 134 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 HDHD3Q9BSH5 251 aaPredicted RBP8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 CACNG6Q9BXT2 260 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 RGCCQ9H4X1 137 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 STEAP1Q9UHE8 339 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 METRNQ9UJH8 293 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 FOXJ3Q9UPW0 622 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 NIPBLQ6KC79 2804 aaeCLIP8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 ABCA2Q9BZC7 2435 aa8.05□□□□□ -1.12
HMGCLL1-206ENST00000428842 IGLV3-9A0A075B6K5 115 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 LOC390937A0A1W2PQ73 354 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 IGHV3-13P01766 116 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 SULT1A3P0DMM9 295 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 SULT1A4P0DMN0 295 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 ANXA3P12429 323 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 CDK2P24941 298 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 PDZK1IP1Q13113 114 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 FBXL14Q8N1E6 418 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 FAM169BQ8N8A8 192 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 UBALD1Q8TB05 177 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 CCL17Q92583 94 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 SELENOIQ9C0D9 397 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 ATG5Q9H1Y0 275 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 CLEC4MQ9H2X3 399 aaPredicted RBP8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 AUNIPQ9H7T9 357 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 OR14J1Q9UGF5 321 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 SLC23A1Q9UHI7 598 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 TEP1Q99973 2627 aaKnown RBP8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 CREBBPQ92793 2442 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 MEIKINA0A087WXM9 373 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 A6NNC1 897 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 PDCD5O14737 125 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 H2AFB2P0C5Z0 115 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 GNB3P16520 340 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 GDNFP39905 211 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 QRFPP83859 136 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 GLT8D1Q68CQ7 371 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 Q6ZSR3 168 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 TMEM200AQ86VY9 491 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 ZNF295-AS1Q8N0V1 137 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 TPRX1Q8N7U7 411 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 OR56B4Q8NH76 319 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 RBMXL1Q96E39 390 aaKnown RBP8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 CHST6Q9GZX3 395 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 C1orf123Q9NWV4 160 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 NPTNQ9Y639 398 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 MTORP42345 2549 aa8.04□□□□□ -1.12
HMGCLL1-206ENST00000428842 CST4P01036 141 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 CXCL3P19876 107 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 KITLGP21583 273 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 CCR6P51684 374 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 NKAPLQ5M9Q1 402 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 FAAP20Q6NZ36 180 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 C6orf201Q7Z4U5 140 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 OR11H4Q8NGC9 324 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms