RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 SEH1LQ96EE3 360 aa12.91□□□□□ -0.34
COL11A1-204ENST00000427239 BPESC1Q9GZL8 116 aa12.91□□□□□ -0.34
COL11A1-204ENST00000427239 ST3GAL6Q9Y274 331 aa12.91□□□□□ -0.34
COL11A1-204ENST00000427239 CCDC168Q8NDH2 2452 aa12.9□□□□□ -0.34
COL11A1-204ENST00000427239 ISPDA4D126 451 aa12.9□□□□□ -0.34
COL11A1-204ENST00000427239 H3BUI4 141 aa12.9□□□□□ -0.34
COL11A1-204ENST00000427239 SH2D1BO14796 132 aa12.9□□□□□ -0.34
COL11A1-204ENST00000427239 PSG2P11465 335 aa12.9□□□□□ -0.34
COL11A1-204ENST00000427239 MGMTP16455 207 aa12.9□□□□□ -0.34
COL11A1-204ENST00000427239 ART1P52961 327 aa12.9□□□□□ -0.34
COL11A1-204ENST00000427239 AVPI1Q5T686 147 aa12.9□□□□□ -0.34
COL11A1-204ENST00000427239 DCDC5Q6ZRR9 648 aa12.9□□□□□ -0.34
COL11A1-204ENST00000427239 LINC00596Q86U02 117 aa12.9□□□□□ -0.34
COL11A1-204ENST00000427239 TMEM104Q8NE00 496 aa12.9□□□□□ -0.34
COL11A1-204ENST00000427239 C19orf18Q8NEA5 215 aa12.9□□□□□ -0.34
COL11A1-204ENST00000427239 ANGPTL6Q8NI99 470 aa12.9□□□□□ -0.34
COL11A1-204ENST00000427239 TMEM246Q9BRR3 403 aa12.9□□□□□ -0.34
COL11A1-204ENST00000427239 RAB22AQ9UL26 194 aa12.9□□□□□ -0.34
COL11A1-204ENST00000427239 IGHV3OR15-7A0A075B7D8 119 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 RFPL4AA6NLU0 287 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 RFPL4AL1F8VTS6 287 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 TNFRSF13BO14836 293 aaPredicted RBP12.89□□□□□ -0.35
COL11A1-204ENST00000427239 LDLRAD4O15165 306 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 PRDX2P32119 198 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 RBM11P57052 281 aaKnown RBP12.89□□□□□ -0.35
COL11A1-204ENST00000427239 IL13RA2Q14627 380 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 STUMQ69YW2 141 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 OR5T2Q8NGG2 359 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 FAM46BQ96A09 425 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 URM1Q9BTM9 101 aaKnown RBP12.89□□□□□ -0.35
COL11A1-204ENST00000427239 TMEM59Q9BXS4 323 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 SELENOIQ9C0D9 397 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 BANF2Q9H503 90 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 CCDC59Q9P031 241 aaKnown RBP12.89□□□□□ -0.35
COL11A1-204ENST00000427239 KAAG1Q9UBP8 84 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 OR5V1Q9UGF6 321 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 SPATA2Q9UM82 520 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 ETV7Q9Y603 341 aa12.89□□□□□ -0.35
COL11A1-204ENST00000427239 IGKV1D-17A0A075B6S4 117 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 IGHV4-30-2A0A087WSY4 118 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 TMEM272A0A1B0GTI8 110 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 A0A1W2PP11 408 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 FAM90A10PA6NDY2 464 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 FAM90A18PA6NE21 464 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 FAM90A16PA6NEW6 464 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 FAM90A20PA6NIJ5 464 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 FAM90A8PA6NJQ4 464 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 FAM90A7PA6NKC0 464 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 FAM90A22PA8MWA6 464 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 FAM90A12PA8MX19 464 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 FAM90A5PA8MXJ8 464 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 FAM90A23PA8MXZ1 464 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 MPIG6BO95866 241 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 GYPAP02724 150 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 FAM90A15PP0C7V4 464 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 FAM90A13PP0C7W8 464 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 FAM90A14PP0C7W9 464 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 FAM90A24PP0C7X0 464 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 RAB6AP20340 208 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 RPS27AP62979 156 aaKnown RBP12.88□□□□□ -0.35
COL11A1-204ENST00000427239 UNC119Q13432 240 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 DCTN2Q13561 401 aaKnown RBP12.88□□□□□ -0.35
COL11A1-204ENST00000427239 OR10K2Q6IF99 312 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 SLC36A1Q7Z2H8 476 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 MED30Q96HR3 178 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 GAL3ST1Q99999 423 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 MIOXQ9UGB7 285 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 OR14J1Q9UGF5 321 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 PCDHB10Q9UN67 800 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 A0A0B4J203 849 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 PAHP00439 452 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 CHRM2P08172 466 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 SNRPBP14678 240 aaKnown RBP12.88□□□□□ -0.35
COL11A1-204ENST00000427239 MPV17LQ2QL34 196 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 PIGYQ3MUY2 71 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 MZT2AQ6P582 158 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 ZNF788Q6ZQV5 615 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 KRTAP1-3Q8IUG1 177 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 ZNF561Q8N587 486 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 CHST4Q8NCG5 386 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 SDSLQ96GA7 329 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 Q96M66 194 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 ZNF665Q9H7R5 613 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 IFT22Q9H7X7 185 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 IL36RNQ9UBH0 155 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 ZNF222Q9UK12 451 aa12.88□□□□□ -0.35
COL11A1-204ENST00000427239 TEX15Q9BXT5 2789 aa12.87□□□□□ -0.35
COL11A1-204ENST00000427239 METTL21EPA6NDL7 271 aa12.87□□□□□ -0.35
COL11A1-204ENST00000427239 GEMIN2O14893 280 aaKnown RBP12.87□□□□□ -0.35
COL11A1-204ENST00000427239 DEGS1O15121 323 aa12.87□□□□□ -0.35
COL11A1-204ENST00000427239 TMPRSS2O15393 492 aa12.87□□□□□ -0.35
COL11A1-204ENST00000427239 HAND1O96004 215 aa12.87□□□□□ -0.35
COL11A1-204ENST00000427239 LMO1P25800 156 aa12.87□□□□□ -0.35
COL11A1-204ENST00000427239 DUSP1P28562 367 aa12.87□□□□□ -0.35
COL11A1-204ENST00000427239 GABRA2P47869 451 aa12.87□□□□□ -0.35
COL11A1-204ENST00000427239 FAM89BQ8N5H3 189 aa12.87□□□□□ -0.35
COL11A1-204ENST00000427239 CMTM3Q96MX0 182 aa12.87□□□□□ -0.35
COL11A1-204ENST00000427239 TM2D1Q9BX74 207 aa12.87□□□□□ -0.35
COL11A1-204ENST00000427239 SPACA1Q9HBV2 294 aa12.87□□□□□ -0.35
COL11A1-204ENST00000427239 NKX6-3A6NJ46 265 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms