RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 NDUFB6O95139 128 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 SPINK2P20155 84 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 DIRC2Q96SL1 478 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 RPS10-NUDT3A0A1W2PQS6 291 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 MPV17LQ2QL34 196 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 TMEM182Q6ZP80 229 aaPredicted RBP12.15□□□□□ -0.46
RPL28-202ENST00000426763 SCARB1Q8WTV0 552 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 TMEM230Q96A57 120 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 KCNK17Q96T54 332 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 OR2D2Q9H210 308 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 MSL2Q9HCI7 577 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 OOEPA6NGQ2 149 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 SLC25A47Q6Q0C1 308 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 LRRTM1Q86UE6 522 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 PRSS50Q9UI38 385 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 CRYM-AS1A6NIL9 109 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 ACOT6Q3I5F7 207 aaPredicted RBP12.15□□□□□ -0.46
RPL28-202ENST00000426763 SVBPQ8N300 66 aa12.15□□□□□ -0.46
RPL28-202ENST00000426763 RECKO95980 971 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 SEMG1P04279 462 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 H2AFB1P0C5Y9 115 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 SNTB1Q13884 538 aaKnown RBP12.14□□□□□ -0.47
RPL28-202ENST00000426763 OR52B4Q8NGK2 314 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 SFXN3Q9BWM7 321 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 UCP2P55851 309 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 ARL16Q0P5N6 197 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 ADTRPQ96IZ2 230 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 TUBG2Q9NRH3 451 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 LIPGQ9Y5X9 500 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 PUS1Q9Y606 427 aaKnown RBP eCLIP12.14□□□□□ -0.47
RPL28-202ENST00000426763 MDFIC2A0A1B0GVS7 189 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 MBP02144 154 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 LPAR6P43657 344 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 IRF3Q14653 427 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 SOHLH1Q5JUK2 328 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 GLCCI1Q86VQ1 547 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 SKA3Q8IX90 412 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 YIPF5Q969M3 257 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 RCL1Q9Y2P8 373 aaKnown RBP12.14□□□□□ -0.47
RPL28-202ENST00000426763 LALBAP00709 142 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 C17orf107Q6ZR85 190 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 LINC00596Q86U02 117 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 KCNRGQ8N5I3 272 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 MAP6Q96JE9 813 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 TMED3Q9Y3Q3 217 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 A0A0U1RQV5 110 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 TRDCB7Z8K6 153 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 MS4A18H0YCH9 400 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 GEMIN2O14893 280 aaKnown RBP12.14□□□□□ -0.47
RPL28-202ENST00000426763 LY86O95711 162 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 GZMHP20718 246 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 PDZK1IP1Q13113 114 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 MS4A18Q3C1V0 323 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 RIPPLY2Q5TAB7 128 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 GLDNQ6ZMI3 551 aaPredicted RBP12.14□□□□□ -0.47
RPL28-202ENST00000426763 AKR1E2Q96JD6 320 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 OCEL1Q9H607 264 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 AK3Q9UIJ7 227 aa12.14□□□□□ -0.47
RPL28-202ENST00000426763 TGM1P22735 817 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 ACKR3P25106 362 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 SPICQ8N5J4 248 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 OR1K1Q8NGR3 316 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 SCNM1Q9BWG6 230 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 TMPRSS13Q9BYE2 586 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 SP6Q3SY56 376 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 MRPL14Q6P1L8 145 aaKnown RBP12.13□□□□□ -0.47
RPL28-202ENST00000426763 ACTR3CQ9C0K3 210 aaPredicted RBP12.13□□□□□ -0.47
RPL28-202ENST00000426763 HES4Q9HCC6 221 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 OR10J4P0C629 311 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 C15orf54Q8N8G6 183 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 ZNF485Q8NCK3 441 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 ZBTB44Q8NCP5 570 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 WDR13Q9H1Z4 485 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 KLHDC2Q9Y2U9 406 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 NPTNQ9Y639 398 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 ZNF519Q8TB69 540 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 ADGRG7Q96K78 797 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 HEXA-AS1Q9H8Q6 139 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 FKBP11Q9NYL4 201 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 STARD10Q9Y365 291 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 MGAMO43451 1857 aa12.13□□□□□ -0.47
RPL28-202ENST00000426763 TTRP02766 147 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 BRS3P32247 399 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 PPP1R1CQ8WVI7 109 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 SRXN1Q9BYN0 137 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 AKIRIN1Q9H9L7 192 aaPredicted RBP12.12□□□□□ -0.47
RPL28-202ENST00000426763 C3orf85A0A1B0GTC6 90 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 CA11O75493 328 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 ZNF205O95201 554 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 CBR1P16152 277 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 COX5AP20674 150 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 KCNK15Q9H427 330 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.12□□□□□ -0.47
RPL28-202ENST00000426763 BRWD1Q9NSI6 2320 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 NINQ8N4C6 2090 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 ABCA7Q8IZY2 2146 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 AHCTF1Q8WYP5 2266 aa12.12□□□□□ -0.47
RPL28-202ENST00000426763 MRPS11P82912 194 aaKnown RBP12.12□□□□□ -0.47
RPL28-202ENST00000426763 ADAT3Q96EY9 351 aaPredicted RBP12.12□□□□□ -0.47
RPL28-202ENST00000426763 CYB5R1Q9UHQ9 305 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms