RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 YTHDF1Q9BYJ9 559 aaKnown RBP10.44□□□□□ -0.74
GPC1-204ENST00000426280 CHIAQ9BZP6 476 aa10.44□□□□□ -0.74
GPC1-204ENST00000426280 KPTNQ9Y664 436 aa10.44□□□□□ -0.74
GPC1-204ENST00000426280 FBN3Q75N90 2809 aa10.44□□□□□ -0.74
GPC1-204ENST00000426280 ANK2Q01484 3957 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 TRBV5-5A0A0J9YX44 114 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 A0A1W2PPK0 400 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 NKX6-3A6NJ46 265 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 CLDN34H7C241 214 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 RPSAP08865 295 aaKnown RBP10.43□□□□□ -0.74
GPC1-204ENST00000426280 ATF1P18846 271 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 CAV3P56539 151 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 EMX1Q04741 257 aaPredicted RBP10.43□□□□□ -0.74
GPC1-204ENST00000426280 ACSM1Q08AH1 577 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 INSL4Q14641 139 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 PDCD1Q15116 288 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 C11orf91Q3C1V1 193 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 TMEM200BQ69YZ2 307 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 SPARTQ8N0X7 666 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 GPR148Q8TDV2 347 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 PP6455Q8WZ26 134 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 ZDHHC16Q969W1 377 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 C10orf35Q96D05 121 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 SPACA5Q96QH8 159 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 PKIBQ9C010 78 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 ACOT13Q9NPJ3 140 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 RASL12Q9NYN1 266 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 TAS2R4Q9NYW5 299 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 OR14J1Q9UGF5 321 aa10.43□□□□□ -0.74
GPC1-204ENST00000426280 IGKV1-12A0A0C4DH73 117 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 TMEM82A0PJX8 343 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 FAM181BA6NEQ2 426 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 HAX1O00165 279 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 SPRY1O43609 319 aaPredicted RBP10.42□□□□□ -0.74
GPC1-204ENST00000426280 GATBO75879 557 aaKnown RBP10.42□□□□□ -0.74
GPC1-204ENST00000426280 NXPH2O95156 264 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 SERPINA3P01011 423 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 IGKV1D-12P01611 117 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 IGHV4-59P01825 116 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 OCM2P0CE71 109 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 CCL3L1P16619 93 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 MDKP21741 143 aaPredicted RBP10.42□□□□□ -0.74
GPC1-204ENST00000426280 AZGP1P25311 298 aaKnown RBP10.42□□□□□ -0.74
GPC1-204ENST00000426280 DUSP1P28562 367 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 FUT6P51993 359 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 BDH1Q02338 343 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 COL10A1Q03692 680 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 SRSF4Q08170 494 aaKnown RBP10.42□□□□□ -0.74
GPC1-204ENST00000426280 IL24Q13007 206 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 ZNF273Q14593 569 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 TBCEQ15813 527 aaPredicted RBP10.42□□□□□ -0.74
GPC1-204ENST00000426280 LIPKQ5VXJ0 399 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 C16orf87Q6PH81 154 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 SLC25A26Q70HW3 274 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 UTS2BQ765I0 119 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 FAM185AQ8N0U4 392 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 PARP16Q8N5Y8 322 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 OR52N4Q8NGI2 321 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 OR51A2Q8NGJ7 313 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 TMEM106AQ96A25 262 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 RFT1Q96AA3 541 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 OPALINQ96PE5 141 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 OR14A2Q96R54 314 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 MGLLQ99685 303 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 NKX3-1Q99801 234 aaPredicted RBP10.42□□□□□ -0.74
GPC1-204ENST00000426280 TMED9Q9BVK6 235 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 ZCCHC4Q9H5U6 513 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 SLC7A11Q9UPY5 501 aa10.42□□□□□ -0.74
GPC1-204ENST00000426280 GPR37O15354 613 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 PIN1P1O15428 100 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 ANGPTL7O43827 346 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 ZNF737O75373 536 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 CD1AP06126 327 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 BCL3P20749 454 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 IER3P46695 156 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 CAPZA1P52907 286 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 DLX6P56179 175 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 BPIFB3P59826 476 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 RPS25P62851 125 aaKnown RBP10.41□□□□□ -0.74
GPC1-204ENST00000426280 MLLT11Q13015 90 aaPredicted RBP10.41□□□□□ -0.74
GPC1-204ENST00000426280 TPBGQ13641 420 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 CNN3Q15417 329 aaKnown RBP10.41□□□□□ -0.74
GPC1-204ENST00000426280 Q499Y3 187 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 KCTD21Q4G0X4 260 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 YIF1BQ5BJH7 314 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 ZNF773Q6PK81 442 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 FIP1L1Q6UN15 594 aaKnown RBP10.41□□□□□ -0.74
GPC1-204ENST00000426280 TCF23Q7RTU1 214 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 ZNF367Q7RTV3 350 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 SERPINA12Q8IW75 414 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 MKXQ8IYA7 352 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 KIR3DL3Q8N743 410 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 C3orf56Q8N813 242 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 UFD1Q92890 307 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 TMEM203Q969S6 136 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 BORCS8Q96FH0 119 aa10.41□□□□□ -0.74
GPC1-204ENST00000426280 RBFOX1Q9NWB1 397 aaKnown RBP10.41□□□□□ -0.74
GPC1-204ENST00000426280 TRAV8-7A0A075B6U6 113 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 A0A1W2PQ09 198 aa10.4□□□□□ -0.74
GPC1-204ENST00000426280 MEGF11A6BM72 1044 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms