RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 OR2M3Q8NG83 312 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 PRRX2Q99811 253 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 PRELID3BQ9Y3B1 194 aa11.66□□□□□ -0.54
USP42-203ENST00000426246 CPAMD8Q8IZJ3 1885 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 NRASP01111 189 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 RAB13P51153 203 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 SPINK14Q6IE38 97 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 PRSS54Q6PEW0 395 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 SFT2D1Q8WV19 159 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 UQCC2Q9BRT2 126 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 TUBAL3A6NHL2 446 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 UMAD1C9J7I0 102 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 CD8AP01732 235 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 SELEP16581 610 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 HAAOP46952 286 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 GPM6AP51674 278 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 IL11RAQ14626 422 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 HFEQ30201 348 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 DHRS11Q6UWP2 260 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 LOXL4Q96JB6 756 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 NRIP2Q9BQI9 281 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 SLC2A8Q9NY64 477 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 PISDQ9UG56 409 aa11.65□□□□□ -0.54
USP42-203ENST00000426246 OR6C65A6NJZ3 312 aa11.65□□□□□ -0.55
USP42-203ENST00000426246 CDX4O14627 284 aaPredicted RBP11.65□□□□□ -0.55
USP42-203ENST00000426246 IGHV3-13P01766 116 aa11.65□□□□□ -0.55
USP42-203ENST00000426246 IGHV3-7P01780 117 aa11.65□□□□□ -0.55
USP42-203ENST00000426246 GSTP1P09211 210 aaKnown RBP11.65□□□□□ -0.55
USP42-203ENST00000426246 ZNF17P17021 662 aa11.65□□□□□ -0.55
USP42-203ENST00000426246 FSTP19883 344 aa11.65□□□□□ -0.55
USP42-203ENST00000426246 RAB5BP61020 215 aa11.65□□□□□ -0.55
USP42-203ENST00000426246 FDX2Q6P4F2 183 aa11.65□□□□□ -0.55
USP42-203ENST00000426246 MARVELD3Q96A59 401 aa11.65□□□□□ -0.55
USP42-203ENST00000426246 RARRES2Q99969 163 aa11.65□□□□□ -0.55
USP42-203ENST00000426246 NAA11Q9BSU3 229 aaPredicted RBP11.65□□□□□ -0.55
USP42-203ENST00000426246 FAM117AQ9C073 453 aa11.65□□□□□ -0.55
USP42-203ENST00000426246 ZFP57Q9NU63 452 aa11.65□□□□□ -0.55
USP42-203ENST00000426246 TRAV20A0A0B4J274 112 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 C5orf49A4QMS7 147 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 ZFP92A6NM28 416 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 RBP2P50120 134 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 DUSP3P51452 185 aaPredicted RBP11.64□□□□□ -0.55
USP42-203ENST00000426246 TRA2AQ13595 282 aaKnown RBP eCLIP11.64□□□□□ -0.55
USP42-203ENST00000426246 ARRDC1Q8N5I2 433 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 SLC25A43Q8WUT9 341 aaPredicted RBP11.64□□□□□ -0.55
USP42-203ENST00000426246 MARS2Q96GW9 593 aaKnown RBP11.64□□□□□ -0.55
USP42-203ENST00000426246 CNTNAP3Q9BZ76 1288 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 BIN3Q9NQY0 253 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 ARFGEF3Q5TH69 2177 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 BORCS7-ASMTA0A0B4J1R7 106 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 DHRS3O75911 302 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 RFPL3SP0C7P2 107 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 FPR2P25090 351 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 PPP1CCP36873 323 aaKnown RBP11.64□□□□□ -0.55
USP42-203ENST00000426246 SSR4P51571 173 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 ECH1Q13011 328 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 MALLQ13021 153 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 ZNF674Q2M3X9 581 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 AWAT1Q58HT5 328 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 UTP23Q9BRU9 249 aaKnown RBP11.64□□□□□ -0.55
USP42-203ENST00000426246 PMS2P1A4D2B8 440 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 ISG15P05161 165 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 IAPPP10997 89 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 ZNF708P17019 499 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 AADACL3Q5VUY0 350 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 OR14K1Q8NGZ2 314 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 OR2G3Q8NGZ4 309 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 EMG1Q92979 244 aaKnown RBP11.64□□□□□ -0.55
USP42-203ENST00000426246 OR14J1Q9UGF5 321 aa11.64□□□□□ -0.55
USP42-203ENST00000426246 LDLRAD4O15165 306 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 PLA2G5P39877 138 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 FABP9Q0Z7S8 132 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 LCN15Q6UWW0 184 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 CXorf67Q86X51 503 aaPredicted RBP11.63□□□□□ -0.55
USP42-203ENST00000426246 LINC00518Q8N0U6 118 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 FGFBP3Q8TAT2 258 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 HES7Q9BYE0 225 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 NELFAQ9H3P2 528 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 ANXA10Q9UJ72 324 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 ABCA4P78363 2273 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 MGAQ8IWI9 3026 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 ATMQ13315 3056 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 SCAND1P57086 179 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 HOXA4Q00056 320 aaPredicted RBP11.63□□□□□ -0.55
USP42-203ENST00000426246 FLI1Q01543 452 aaPredicted RBP11.63□□□□□ -0.55
USP42-203ENST00000426246 DEGS2Q6QHC5 323 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 SRXN1Q9BYN0 137 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 FANCFQ9NPI8 374 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 RNF150Q9ULK6 438 aa11.63□□□□□ -0.55
USP42-203ENST00000426246 SCGNO76038 276 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 CD59P13987 128 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 FGF8P55075 233 aaPredicted RBP11.62□□□□□ -0.55
USP42-203ENST00000426246 GRB2P62993 217 aaKnown RBP11.62□□□□□ -0.55
USP42-203ENST00000426246 EIF5AP63241 154 aaKnown RBP11.62□□□□□ -0.55
USP42-203ENST00000426246 SSBP1Q04837 148 aaKnown RBP11.62□□□□□ -0.55
USP42-203ENST00000426246 GUK1Q16774 197 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 NSUN5P2Q63ZY6 315 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 RPUSD3Q6P087 351 aaKnown RBP11.62□□□□□ -0.55
USP42-203ENST00000426246 ZNF611Q8N823 705 aa11.62□□□□□ -0.55
USP42-203ENST00000426246 H7C1Q1 480 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms