RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 NSG2Q9Y328 171 aa11.77□□□□□ -0.53
LRCH3-203ENST00000425562 OR5H15A6NDH6 313 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 ZNF587BE7ETH6 402 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 LYPD6BQ8NI32 183 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 GTF3AQ92664 365 aaKnown RBP11.76□□□□□ -0.53
LRCH3-203ENST00000425562 C8orf33Q9H7E9 229 aaPredicted RBP11.76□□□□□ -0.53
LRCH3-203ENST00000425562 POMT1Q9Y6A1 747 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 ZFP92A6NM28 416 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 ZNF728P0DKX0 622 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 RBP2P50120 134 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 DAP3P51398 398 aaKnown RBP11.76□□□□□ -0.53
LRCH3-203ENST00000425562 SSX2Q16385 188 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 ZNF385CQ66K41 422 aaPredicted RBP11.76□□□□□ -0.53
LRCH3-203ENST00000425562 TGIF2LXQ8IUE1 241 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 PIGLQ9Y2B2 252 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 KCNIP3Q9Y2W7 256 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 IGKV3D-11A0A0A0MRZ8 115 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 ST8SIA5O15466 376 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 SEC11BP0C7V7 166 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 IGFBP4P22692 258 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 APLNRP35414 380 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 CSNK1A1P48729 337 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 FGF8P55075 233 aaPredicted RBP11.76□□□□□ -0.53
LRCH3-203ENST00000425562 RAB11AP62491 216 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 ZNF124Q15973 351 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 C21orf62-AS1Q17RA5 79 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 AKR1C8PQ5T2L2 129 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 WDR25Q64LD2 544 aaPredicted RBP11.76□□□□□ -0.53
LRCH3-203ENST00000425562 ABHD5Q8WTS1 349 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 HPSE2Q8WWQ2 592 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 CHST11Q9NPF2 352 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 PISDQ9UG56 409 aa11.76□□□□□ -0.53
LRCH3-203ENST00000425562 IGHV3-15A0A0B4J1V0 119 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.75□□□□□ -0.53
LRCH3-203ENST00000425562 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.75□□□□□ -0.53
LRCH3-203ENST00000425562 CRYM-AS1A6NIL9 109 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 EFNA2O43921 213 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 SCGNO76038 276 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 HLA-HP01893 362 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 HIST1H1BP16401 226 aaKnown RBP11.75□□□□□ -0.53
LRCH3-203ENST00000425562 HSD11B2P80365 405 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 SPIN3Q5JUX0 258 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 FIP1L1Q6UN15 594 aaKnown RBP11.75□□□□□ -0.53
LRCH3-203ENST00000425562 TMEM171Q8WVE6 324 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 GNG13Q9P2W3 67 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 A0A087WZY1 265 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 NKX2-6A6NCS4 301 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 A6NIZ1 184 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 EPHA1P21709 976 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 RAP1BP61224 184 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 EWSR1Q01844 656 aaKnown RBP eCLIP11.75□□□□□ -0.53
LRCH3-203ENST00000425562 MYBPHQ13203 477 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 PIGYQ3MUY2 71 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 CXorf66Q5JRM2 361 aaPredicted RBP11.75□□□□□ -0.53
LRCH3-203ENST00000425562 SLC22A25Q6T423 547 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 HIST3H2BBQ8N257 126 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 SLC35G3Q8N808 338 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 SLC39A7Q92504 469 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 HAS2Q92819 552 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 LYZL4Q96KX0 146 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 PACRGQ96M98 296 aaPredicted RBP11.75□□□□□ -0.53
LRCH3-203ENST00000425562 PLEKHA2Q9HB19 425 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 GPR27Q9NS67 375 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 WASF3Q9UPY6 502 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 WSB1Q9Y6I7 421 aa11.75□□□□□ -0.53
LRCH3-203ENST00000425562 OR5H1A6NKK0 313 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 CEACAM18A8MTB9 384 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 HSPB6O14558 160 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 HSD17B6O14756 317 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 ST8SIA3O43173 380 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 IZUMO4Q1ZYL8 232 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 MPV17LQ2QL34 196 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 SMRP1Q8NCR6 262 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 OR10AD1Q8NGE0 317 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 OR5C1Q8NGR4 320 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 OR1N1Q8NGS0 311 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 NAT6Q93015 286 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 ZNF160Q9HCG1 818 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 SLC2A9Q9NRM0 540 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 KLRF1Q9NZS2 232 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 ANXA10Q9UJ72 324 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 EML6Q6ZMW3 1958 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 IGSF23A1L1A6 192 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 GPR137BO60478 399 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 CYTIPO60759 359 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 MTCP1P56278 107 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 RPL23AP62750 156 aaKnown RBP11.74□□□□□ -0.53
LRCH3-203ENST00000425562 SLC38A9Q8NBW4 561 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 GALNT14Q96FL9 552 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 TP53RKQ96S44 253 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 TUBD1Q9UJT1 453 aa11.74□□□□□ -0.53
LRCH3-203ENST00000425562 BLACEA4D250 179 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 SEC14L6B5MCN3 397 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 C3orf80F5H4A9 247 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 MMP7P09237 267 aaPredicted RBP11.73□□□□□ -0.53
LRCH3-203ENST00000425562 FUT3P21217 361 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 SMAD4Q13485 552 aaKnown RBP11.73□□□□□ -0.53
LRCH3-203ENST00000425562 PPA1Q15181 289 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 LCN15Q6UWW0 184 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms