RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SLC7A11Q9UPY5 501 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 SPTBN1Q01082 2364 aaKnown RBP10.28□□□□□ -0.76
PTPRN-204ENST00000423636 OR6C6A6NF89 314 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 DUS4LO95620 317 aaKnown RBP10.28□□□□□ -0.76
PTPRN-204ENST00000423636 IGHV3-13P01766 116 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 IGHV3-7P01780 117 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 CRHP06850 196 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 CST2P09228 141 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 HOXD11P31277 338 aaPredicted RBP10.28□□□□□ -0.76
PTPRN-204ENST00000423636 SLC10A1Q14973 349 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 OVCH2Q7RTZ1 564 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 PDZD9Q8IXQ8 264 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 SPRY4Q9C004 299 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 HRH4Q9H3N8 390 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 EMC3Q9P0I2 261 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 TNFSF18Q9UNG2 199 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 FAM96BQ9Y3D0 163 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 hCG_38984A0A1B0GV85 526 aa10.27□□□□□ -0.76
PTPRN-204ENST00000423636 HSD17B6O14756 317 aa10.27□□□□□ -0.76
PTPRN-204ENST00000423636 GRPP07492 148 aa10.27□□□□□ -0.76
PTPRN-204ENST00000423636 CD37P11049 281 aa10.27□□□□□ -0.76
PTPRN-204ENST00000423636 PRKACAP17612 351 aa10.27□□□□□ -0.76
PTPRN-204ENST00000423636 CFPP27918 469 aa10.27□□□□□ -0.76
PTPRN-204ENST00000423636 ABCA11PQ4W5N1 156 aa10.27□□□□□ -0.76
PTPRN-204ENST00000423636 RGS7BPQ6MZT1 257 aaPredicted RBP10.27□□□□□ -0.76
PTPRN-204ENST00000423636 PTX4Q96A99 478 aa10.27□□□□□ -0.76
PTPRN-204ENST00000423636 TRIB1Q96RU8 372 aa10.27□□□□□ -0.76
PTPRN-204ENST00000423636 B4GALT7Q9UBV7 327 aa10.27□□□□□ -0.76
PTPRN-204ENST00000423636 ANXA10Q9UJ72 324 aa10.27□□□□□ -0.76
PTPRN-204ENST00000423636 NME2P22392 152 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 DEFB109BQ30KR1 87 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 ABLIM2Q6H8Q1 611 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 TMEM88Q6PEY1 159 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 SCARB1Q8WTV0 552 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 REG4Q9BYZ8 158 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 PFDN2Q9UHV9 154 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 C14orf166Q9Y224 244 aaKnown RBP10.27□□□□□ -0.77
PTPRN-204ENST00000423636 B8ZZF3 427 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 FCGR3AP08637 254 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 NR2C1P13056 603 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 ATF4P18848 351 aaPredicted RBP10.27□□□□□ -0.77
PTPRN-204ENST00000423636 ZNF766Q5HY98 468 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 FAM180AQ6UWF9 173 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 HPSE2Q8WWQ2 592 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 SF3B5Q9BWJ5 86 aaKnown RBP10.27□□□□□ -0.77
PTPRN-204ENST00000423636 UFSP2Q9NUQ7 469 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 OR14J1Q9UGF5 321 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 SH3BGRL2Q9UJC5 107 aa10.27□□□□□ -0.77
PTPRN-204ENST00000423636 RCL1Q9Y2P8 373 aaKnown RBP10.27□□□□□ -0.77
PTPRN-204ENST00000423636 C1QL1O75973 258 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 SFT2D2O95562 160 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 HIST1H3AP68431 136 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 HIST2H3PS2Q5TEC6 136 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 RPL7L1Q6DKI1 246 aaKnown RBP10.26□□□□□ -0.77
PTPRN-204ENST00000423636 C20orf204Q6ZNR8 217 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 ZNF826PQ6ZT77 177 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 HIST2H3AQ71DI3 136 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 MDP1Q86V88 176 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 TPRX1Q8N7U7 411 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 ALX4Q9H161 411 aaPredicted RBP10.26□□□□□ -0.77
PTPRN-204ENST00000423636 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.26□□□□□ -0.77
PTPRN-204ENST00000423636 MTCH1Q9NZJ7 389 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 PHF1O43189 567 aaPredicted RBP10.26□□□□□ -0.77
PTPRN-204ENST00000423636 IGLV3-1P01715 115 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 NUP62P37198 522 aaPredicted RBP10.26□□□□□ -0.77
PTPRN-204ENST00000423636 WNT5AP41221 380 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 H3F3CQ6NXT2 135 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 FAM89BQ8N5H3 189 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 OR52M1Q8NGK5 317 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 SLX1AQ9BQ83 275 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 OCSTAMPQ9BR26 566 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 RALYQ9UKM9 306 aaKnown RBP10.26□□□□□ -0.77
PTPRN-204ENST00000423636 OSGIN2Q9Y236 505 aa10.26□□□□□ -0.77
PTPRN-204ENST00000423636 HMSDA8MTL9 139 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 ZNF16P17020 682 aaPredicted RBP10.25□□□□□ -0.77
PTPRN-204ENST00000423636 AADACP22760 399 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 FHITP49789 147 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 SLC51BQ86UW2 128 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 WBP1Q96G27 269 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 TREM2Q9NZC2 230 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 ABI3Q9P2A4 366 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 FBXO9Q9UK97 447 aaPredicted RBP10.25□□□□□ -0.77
PTPRN-204ENST00000423636 H0YL77 283 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 SIRPB1O00241 398 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 IGHEP01854 428 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 ZNF44P15621 663 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 ZNF708P17019 499 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 EPHA1P21709 976 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 FKBP2P26885 142 aaKnown RBP10.25□□□□□ -0.77
PTPRN-204ENST00000423636 AKR1C3P42330 323 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 RBM39Q14498 530 aaKnown RBP10.25□□□□□ -0.77
PTPRN-204ENST00000423636 CNN3Q15417 329 aaKnown RBP10.25□□□□□ -0.77
PTPRN-204ENST00000423636 LTC4SQ16873 150 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 PLA2G2CQ5R387 149 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 DBX2Q6ZNG2 339 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 ACOT7LQ6ZUV0 252 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 ZDHHC22Q8N966 263 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 PXT1Q8NFP0 134 aa10.25□□□□□ -0.77
PTPRN-204ENST00000423636 RTN4IP1Q8WWV3 396 aaPredicted RBP10.25□□□□□ -0.77
PTPRN-204ENST00000423636 OR2J1Q9GZK6 312 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms