RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 FAM58AQ8N1B3 248 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 FGFRL1Q8N441 504 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 CHST4Q8NCG5 386 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 SETD9Q8NE22 299 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 OR5AK2Q8NH90 309 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 FGGYQ96C11 551 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 LGALS12Q96DT0 336 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 PELI1Q96FA3 418 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 ZNF488Q96MN9 340 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 ZNF714Q96N38 554 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 SLC29A1Q99808 456 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 ZCCHC4Q9H5U6 513 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 C16orf95Q9H693 158 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 C19orf12Q9NSK7 152 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 FAM118AQ9NWS6 357 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 CHCHD3Q9NX63 227 aaKnown RBP7.07□□□□□ -1.28
MDC1-204ENST00000422266 MTCH1Q9NZJ7 389 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 DHDHQ9UQ10 334 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 SOX21Q9Y651 276 aaPredicted RBP7.07□□□□□ -1.28
MDC1-204ENST00000422266 LINC00312Q9Y6C7 94 aa7.07□□□□□ -1.28
MDC1-204ENST00000422266 C17orf98A8MV24 154 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 MGST3O14880 152 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 SULT1B1O43704 296 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 TSPAN9O75954 239 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 CLPXO76031 633 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 HAND1O96004 215 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 GABRB1P18505 474 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 MYL12AP19105 171 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 OMGP23515 440 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 GABRR1P24046 479 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 VHLP40337 213 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 POU3F4P49335 361 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 AQP4P55087 323 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 GRK1Q15835 563 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 OR52W1Q6IF63 320 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 IZUMO2Q6UXV1 221 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 RDH10Q8IZV5 341 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 PARP16Q8N5Y8 322 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 PACRGLQ8N7B6 248 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 WFDC12Q8WWY7 111 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 UBE2FQ969M7 185 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 SLAMF9Q96A28 289 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 CREB3L1Q96BA8 519 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 MALSU1Q96EH3 234 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 ADAT3Q96EY9 351 aaPredicted RBP7.06□□□□□ -1.28
MDC1-204ENST00000422266 SSX3Q99909 188 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 JAM3Q9BX67 310 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 VCXQ9H320 206 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 GAL3ST2Q9H3Q3 398 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 RANBP3Q9H6Z4 567 aaPredicted RBP7.06□□□□□ -1.28
MDC1-204ENST00000422266 ELL3Q9HB65 397 aaPredicted RBP7.06□□□□□ -1.28
MDC1-204ENST00000422266 EXOSC4Q9NPD3 245 aaKnown RBP7.06□□□□□ -1.28
MDC1-204ENST00000422266 PCDHB16Q9NRJ7 776 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 ABCB10Q9NRK6 738 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 ERVK13-1Q9NX77 482 aa7.06□□□□□ -1.28
MDC1-204ENST00000422266 UBE2J1Q9Y385 318 aaPredicted RBP7.06□□□□□ -1.28
MDC1-204ENST00000422266 IGKV1-27A0A075B6S5 117 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 TRGV10A0A0A0MS01 117 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 OR4C45A6NMZ5 311 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 VGLL3A8MV65 326 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 H3BSH0 61 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 ZNF737O75373 536 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 CSN2P05814 226 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 HCKP08631 526 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 PRKACAP17612 351 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 RAB3AP20336 220 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 NANOS3P60323 173 aaKnown RBP7.05□□□□□ -1.28
MDC1-204ENST00000422266 KLRD1Q13241 179 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 IL18R1Q13478 541 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 TAF9Q16594 264 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 MINOS1Q5TGZ0 78 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 TREML4Q6UXN2 200 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 RTN4RL2Q86UN3 420 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 LHFPL3Q86UP9 236 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 OR11H6Q8NGC7 330 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 OR4M1Q8NGD0 313 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 OR4C13Q8NGP0 309 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 LINC01006Q8NI28 216 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 RPS4Y2Q8TD47 263 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 GPR148Q8TDV2 347 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 TSEN15Q8WW01 171 aaKnown RBP7.05□□□□□ -1.28
MDC1-204ENST00000422266 THRSPQ92748 146 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 CITED1Q99966 193 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 NPFFR1Q9GZQ6 430 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 HMG20AQ9NP66 347 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 PAK1IP1Q9NWT1 392 aaPredicted RBP7.05□□□□□ -1.28
MDC1-204ENST00000422266 FBLN5Q9UBX5 448 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 EXOSC1Q9Y3B2 195 aaKnown RBP7.05□□□□□ -1.28
MDC1-204ENST00000422266 MINOS1-NBL1R4GNA1 71 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 HSPE1-MOB4S4R3N1 261 aa7.05□□□□□ -1.28
MDC1-204ENST00000422266 IGKV1-9A0A0C4DH69 117 aa7.04□□□□□ -1.28
MDC1-204ENST00000422266 A0A1W2PRD5 423 aa7.04□□□□□ -1.28
MDC1-204ENST00000422266 A0A1W2PRF3 423 aa7.04□□□□□ -1.28
MDC1-204ENST00000422266 A0A1W2PRM7 423 aa7.04□□□□□ -1.28
MDC1-204ENST00000422266 H3BUX3 64 aa7.04□□□□□ -1.28
MDC1-204ENST00000422266 KDM4BO94953 1096 aa7.04□□□□□ -1.28
MDC1-204ENST00000422266 ZFPL1O95159 310 aa7.04□□□□□ -1.28
MDC1-204ENST00000422266 TFF1P04155 84 aa7.04□□□□□ -1.28
MDC1-204ENST00000422266 ARG1P05089 322 aa7.04□□□□□ -1.28
MDC1-204ENST00000422266 IGHV1-8P0DP01 117 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms