RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 TAS2R4Q9NYW5 299 aa21.67■■□□□ 1.06
CDK9-202ENST00000421939 IGKV1-12A0A0C4DH73 117 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 RNASEK-C17orf49H0YIS7 233 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 CLDN34H7C241 214 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 KDM4BO94953 1096 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 IGKV1D-12P01611 117 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 DLX1P56177 255 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 TAS2R43P59537 309 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 PRB3Q04118 309 aaPredicted RBP21.66■■□□□ 1.06
CDK9-202ENST00000421939 SLC9A3R2Q15599 337 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 KISS1Q15726 138 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 NCR3LG1Q68D85 454 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 ASPHD2Q6ICH7 369 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 SAXO1Q8IYX7 474 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 ZFP41Q8N8Y5 198 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 OR4M1Q8NGD0 313 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 OR51A2Q8NGJ7 313 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 TNFRSF14Q92956 283 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 CPNE2Q96FN4 548 aaPredicted RBP21.66■■□□□ 1.06
CDK9-202ENST00000421939 UNKLQ9H9P5 680 aaKnown RBP21.66■■□□□ 1.06
CDK9-202ENST00000421939 HMG20AQ9NP66 347 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 NOX4Q9NPH5 578 aa21.66■■□□□ 1.06
CDK9-202ENST00000421939 ZP1P60852 638 aa21.65■■□□□ 1.06
CDK9-202ENST00000421939 KLRD1Q13241 179 aa21.65■■□□□ 1.06
CDK9-202ENST00000421939 ZNF146Q15072 292 aa21.65■■□□□ 1.06
CDK9-202ENST00000421939 SPIN3Q5JUX0 258 aa21.65■■□□□ 1.06
CDK9-202ENST00000421939 C6orf141Q5SZD1 244 aa21.65■■□□□ 1.06
CDK9-202ENST00000421939 ZSCAN4Q8NAM6 433 aaPredicted RBP21.65■■□□□ 1.06
CDK9-202ENST00000421939 OR13C5Q8NGS8 318 aa21.65■■□□□ 1.06
CDK9-202ENST00000421939 TBC1D15Q8TC07 691 aa21.65■■□□□ 1.06
CDK9-202ENST00000421939 GHSRQ92847 366 aa21.65■■□□□ 1.06
CDK9-202ENST00000421939 A0A1W2PPH5 198 aa21.64■■□□□ 1.05
CDK9-202ENST00000421939 RNASE1P07998 156 aaKnown RBP21.64■■□□□ 1.05
CDK9-202ENST00000421939 CALCBP10092 127 aa21.64■■□□□ 1.05
CDK9-202ENST00000421939 DUSP1P28562 367 aa21.64■■□□□ 1.05
CDK9-202ENST00000421939 SNU13P55769 128 aaKnown RBP21.64■■□□□ 1.05
CDK9-202ENST00000421939 WNT4P56705 351 aa21.64■■□□□ 1.05
CDK9-202ENST00000421939 TMEM200BQ69YZ2 307 aa21.64■■□□□ 1.05
CDK9-202ENST00000421939 OR8H2Q8N162 312 aa21.64■■□□□ 1.05
CDK9-202ENST00000421939 PIP4P2Q8N4L2 257 aa21.64■■□□□ 1.05
CDK9-202ENST00000421939 OR5D13Q8NGL4 314 aa21.64■■□□□ 1.05
CDK9-202ENST00000421939 SLC25A28Q96A46 364 aa21.64■■□□□ 1.05
CDK9-202ENST00000421939 SNX22Q96L94 193 aa21.64■■□□□ 1.05
CDK9-202ENST00000421939 PGLYRP3Q96LB9 341 aa21.64■■□□□ 1.05
CDK9-202ENST00000421939 RHOFQ9HBH0 211 aa21.64■■□□□ 1.05
CDK9-202ENST00000421939 GLS2Q9UI32 602 aa21.64■■□□□ 1.05
CDK9-202ENST00000421939 TRBV5-5A0A0J9YX44 114 aa21.63■■□□□ 1.05
CDK9-202ENST00000421939 A0A0U1RQK1 487 aa21.63■■□□□ 1.05
CDK9-202ENST00000421939 TMEM82A0PJX8 343 aa21.63■■□□□ 1.05
CDK9-202ENST00000421939 MAGEB3O15480 346 aa21.63■■□□□ 1.05
CDK9-202ENST00000421939 HOXA3O43365 443 aaPredicted RBP21.63■■□□□ 1.05
CDK9-202ENST00000421939 TMEM225BP0DP42 221 aa21.63■■□□□ 1.05
CDK9-202ENST00000421939 EEF1B2P24534 225 aaKnown RBP21.63■■□□□ 1.05
CDK9-202ENST00000421939 YIF1BQ5BJH7 314 aa21.63■■□□□ 1.05
CDK9-202ENST00000421939 C17orf107Q6ZR85 190 aa21.63■■□□□ 1.05
CDK9-202ENST00000421939 GDPD3Q7L5L3 318 aa21.63■■□□□ 1.05
CDK9-202ENST00000421939 GCDHQ92947 438 aaPredicted RBP21.63■■□□□ 1.05
CDK9-202ENST00000421939 TENM1Q9UKZ4 2725 aa21.63■■□□□ 1.05
CDK9-202ENST00000421939 CDK1P06493 297 aa21.62■■□□□ 1.05
CDK9-202ENST00000421939 GABRR1P24046 479 aa21.62■■□□□ 1.05
CDK9-202ENST00000421939 EDDM3BP56851 147 aa21.62■■□□□ 1.05
CDK9-202ENST00000421939 PPP3R1P63098 170 aa21.62■■□□□ 1.05
CDK9-202ENST00000421939 ZNF273Q14593 569 aa21.62■■□□□ 1.05
CDK9-202ENST00000421939 Q6YL49 198 aa21.62■■□□□ 1.05
CDK9-202ENST00000421939 ERGIC3Q9Y282 383 aa21.62■■□□□ 1.05
CDK9-202ENST00000421939 GSTK1Q9Y2Q3 226 aa21.62■■□□□ 1.05
CDK9-202ENST00000421939 PCDHGB5Q9Y5G0 923 aa21.62■■□□□ 1.05
CDK9-202ENST00000421939 PNMA8CA0A1B0GUJ8 204 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 TMEM89A2RUT3 159 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 NPFFO15130 113 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 MELTFP08582 738 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 CCL3L1P16619 93 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 MYF6P23409 242 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 UBE2E1P51965 193 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 RPS11P62280 158 aaKnown RBP eCLIP21.61■■□□□ 1.05
CDK9-202ENST00000421939 EDDM3AQ14507 147 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 Q499Y3 187 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 IZUMO2Q6UXV1 221 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 SATL1Q86VE3 508 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 NANOGP1Q8N7R0 232 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 OR52N4Q8NGI2 321 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 GPER1Q99527 375 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 ANKRD60Q9BZ19 345 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 EXOSC4Q9NPD3 245 aaKnown RBP21.61■■□□□ 1.05
CDK9-202ENST00000421939 SCN3BQ9NY72 215 aa21.61■■□□□ 1.05
CDK9-202ENST00000421939 A0A1W2PRD5 423 aa21.6■■□□□ 1.05
CDK9-202ENST00000421939 A0A1W2PRF3 423 aa21.6■■□□□ 1.05
CDK9-202ENST00000421939 A0A1W2PRM7 423 aa21.6■■□□□ 1.05
CDK9-202ENST00000421939 PTGES3LE9PB15 166 aa21.6■■□□□ 1.05
CDK9-202ENST00000421939 GABRPO00591 440 aa21.6■■□□□ 1.05
CDK9-202ENST00000421939 PSPNO60542 156 aa21.6■■□□□ 1.05
CDK9-202ENST00000421939 DOC2BQ14184 412 aa21.6■■□□□ 1.05
CDK9-202ENST00000421939 GRK1Q15835 563 aa21.6■■□□□ 1.05
CDK9-202ENST00000421939 RNLSQ5VYX0 342 aa21.6■■□□□ 1.05
CDK9-202ENST00000421939 PXT1Q8NFP0 134 aa21.6■■□□□ 1.05
CDK9-202ENST00000421939 TNFAIP8L1Q8WVP5 186 aa21.6■■□□□ 1.05
CDK9-202ENST00000421939 MYDGFQ969H8 173 aa21.6■■□□□ 1.05
CDK9-202ENST00000421939 CHST6Q9GZX3 395 aa21.6■■□□□ 1.05
CDK9-202ENST00000421939 TMEM138Q9NPI0 162 aa21.6■■□□□ 1.05
CDK9-202ENST00000421939 FAM96BQ9Y3D0 163 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms