RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 FAM90A16PA6NEW6 464 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 FAM90A20PA6NIJ5 464 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 FAM90A8PA6NJQ4 464 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 FAM90A7PA6NKC0 464 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 RFPL4AA6NLU0 287 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 OR2AT4A6NND4 320 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 FAM90A22PA8MWA6 464 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 FAM90A12PA8MX19 464 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 FAM90A5PA8MXJ8 464 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 FAM90A23PA8MXZ1 464 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 RFPL4AL1F8VTS6 287 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 GEMIN2O14893 280 aaKnown RBP10.45□□□□□ -0.74
TMEM53-206ENST00000420706 RGS5O15539 181 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 PPIHO43447 177 aaKnown RBP10.45□□□□□ -0.74
TMEM53-206ENST00000420706 IGHV2-70P01814 119 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 EIF4EP06730 217 aaKnown RBP10.45□□□□□ -0.74
TMEM53-206ENST00000420706 FAM90A15PP0C7V4 464 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 FAM90A13PP0C7W8 464 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 FAM90A14PP0C7W9 464 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 FAM90A24PP0C7X0 464 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 ELK1P19419 428 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 AMY2BP19961 511 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 GIFP27352 417 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 PRDX2P32119 198 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 VEGFCP49767 419 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 BTG1P62324 171 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 ZMYND11Q15326 602 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 FAM189A2Q15884 450 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 MICBQ29980 383 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 SPIN3Q5JUX0 258 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 UBE2NLQ5JXB2 153 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 AVPI1Q5T686 147 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 ATPAF1Q5TC12 328 aaPredicted RBP10.45□□□□□ -0.74
TMEM53-206ENST00000420706 FIP1L1Q6UN15 594 aaKnown RBP10.45□□□□□ -0.74
TMEM53-206ENST00000420706 LRRC28Q86X40 367 aaPredicted RBP10.45□□□□□ -0.74
TMEM53-206ENST00000420706 CD177Q8N6Q3 437 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 OR6Q1Q8NGQ2 317 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 ANGPTL6Q8NI99 470 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 RAB1CQ92928 201 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 TIMD4Q96H15 378 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 ATG5Q9H1Y0 275 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 OR14J1Q9UGF5 321 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 ZNF222Q9UK12 451 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 PEX16Q9Y5Y5 336 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 IGKV1D-17A0A075B6S4 117 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 FOXI3A8MTJ6 420 aaPredicted RBP10.44□□□□□ -0.74
TMEM53-206ENST00000420706 RAB27BO00194 218 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 SH2D1BO14796 132 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 DEGS1O15121 323 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 SOCS1O15524 211 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 CLPXO76031 633 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 HAND1O96004 215 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 APOA1P02647 267 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 GYPAP02724 150 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 TFF1P04155 84 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 CHRM2P08172 466 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 CPT2P23786 658 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 GABRR1P24046 479 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 LMO1P25800 156 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 GPR6P46095 362 aaPredicted RBP10.44□□□□□ -0.74
TMEM53-206ENST00000420706 GABRA2P47869 451 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 PITPNBP48739 271 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 CEBPDP49716 269 aaPredicted RBP10.44□□□□□ -0.74
TMEM53-206ENST00000420706 TMEM50BP56557 158 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 SCN1BQ07699 218 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 MPV17LQ2QL34 196 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 MOGAT2Q3SYC2 334 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 STUMQ69YW2 141 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 SIGIRRQ6IA17 410 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 DNM1P46Q6ZS02 220 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 LINC00596Q86U02 117 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 LAX1Q8IWV1 398 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 OR56B1Q8NGI3 324 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 RAB40AQ8WXH6 277 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 S100A16Q96FQ6 103 aaKnown RBP10.44□□□□□ -0.74
TMEM53-206ENST00000420706 TMEM246Q9BRR3 403 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 ZNF581Q9P0T4 197 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 GLS2Q9UI32 602 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 METRNQ9UJH8 293 aa10.44□□□□□ -0.74
TMEM53-206ENST00000420706 FAM25AB3EWG3 89 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 FAM25CB3EWG5 89 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 FAM25GB3EWG6 89 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 NDUFS8O00217 210 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 NDUFA2O43678 99 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 OR2H2O95918 312 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 CSF3P09919 207 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 BLVRBP30043 206 aaPredicted RBP10.43□□□□□ -0.74
TMEM53-206ENST00000420706 TNFSF8P32971 234 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 S100A5P33763 92 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 MDH2P40926 338 aaKnown RBP10.43□□□□□ -0.74
TMEM53-206ENST00000420706 IKZF1Q13422 519 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 KCNJ8Q15842 424 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 TMEM155Q4W5P6 130 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 LYPD2Q6UXB3 125 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 ZNF788Q6ZQV5 615 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 Q6ZTK2 550 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 MUC20Q8N307 709 aaPredicted RBP10.43□□□□□ -0.74
TMEM53-206ENST00000420706 DTX3Q8N9I9 347 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 OR10R2Q8NGX6 335 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 C10orf105Q8TEF2 133 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms