RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 WDR13Q9H1Z4 485 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 OR51I2Q9H344 312 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 ERVK-18Q9QC07 812 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 KAAG1Q9UBP8 84 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 DUX4Q9UBX2 424 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 GNG8Q9UK08 70 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 SLC22A13Q9Y226 551 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 TRAV40A0A0B4J280 105 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 KIR2DS1A0A191URI9 304 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 LOC100130705A0A1B0GUX0 176 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 A0A1B0GVI7 797 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 LOC107986453A0A1B0GWG9 222 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 ANKRD61A6NGH8 418 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 A6NIN4 97 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 SNTNA6NMZ2 147 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 H3BSH0 61 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 MGST3O14880 152 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 AKR7A2O43488 359 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 SYT7O43581 403 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 MPZL2O60487 215 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 RHBDL1O75783 438 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 NRASP01111 189 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 NPSP0C0P6 89 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 IGHV4-38-2P0DP08 117 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 DBTP11182 482 aaKnown RBP5.71□□□□□ -1.5
HMGN1-205ENST00000419378 KIR3DL2P43630 455 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 HILS1P60008 231 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 FGF12P61328 243 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 CDONQ4KMG0 1287 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 CLVS2Q5SYC1 327 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 USP43Q70EL4 1123 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 FAM220AQ7Z4H9 259 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 PRSS35Q8N3Z0 413 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 FGFRL1Q8N441 504 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.71□□□□□ -1.5
HMGN1-205ENST00000419378 OR5T2Q8NGG2 359 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 OR5A2Q8NGI9 324 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 RHOXF1Q8NHV9 184 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 APH1BQ8WW43 257 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 ST8SIA4Q92187 359 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 AQP3Q92482 292 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 UPRTQ96BW1 309 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 LGALS12Q96DT0 336 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 RDH12Q96NR8 316 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 CCL13Q99616 98 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 NUDT16L1Q9BRJ7 211 aaKnown RBP5.71□□□□□ -1.5
HMGN1-205ENST00000419378 SUCNR1Q9BXA5 334 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 PLEKHA1Q9HB21 404 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 SEPSECSQ9HD40 501 aaKnown RBP5.71□□□□□ -1.5
HMGN1-205ENST00000419378 GPR173Q9NS66 373 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 SNTG1Q9NSN8 517 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 FAM118AQ9NWS6 357 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 SMPD3Q9NY59 655 aaPredicted RBP5.71□□□□□ -1.5
HMGN1-205ENST00000419378 ZNF69Q9UC07 566 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 NUP50Q9UKX7 468 aa5.71□□□□□ -1.5
HMGN1-205ENST00000419378 EXOGQ9Y2C4 368 aaKnown RBP5.71□□□□□ -1.5
HMGN1-205ENST00000419378 TENM1Q9UKZ4 2725 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 IGHV3OR16-10A0A075B7F0 116 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 DAPL1A0PJW8 107 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 PQLC2LA1A4F0 135 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 NKX6-3A6NJ46 265 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 OR2AT4A6NND4 320 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 J3QT63 122 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 DLGAP1O14490 977 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 NDUFB3O43676 98 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 TFF1P04155 84 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 UBCP0CG48 685 aaKnown RBP5.7□□□□□ -1.5
HMGN1-205ENST00000419378 SELLP14151 372 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 GLRA1P23415 457 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 HAAOP46952 286 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 TGM4P49221 684 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 OR12D2P58182 307 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 NANOS3P60323 173 aaKnown RBP5.7□□□□□ -1.5
HMGN1-205ENST00000419378 ACTA2P62736 377 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 ACTG2P63267 376 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 RCN1Q15293 331 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 DGUOKQ16854 277 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 RNASE12Q5GAN4 147 aaKnown RBP5.7□□□□□ -1.5
HMGN1-205ENST00000419378 LPCAT4Q643R3 524 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 HAGHLQ6PII5 290 aaPredicted RBP5.7□□□□□ -1.5
HMGN1-205ENST00000419378 ZNF788Q6ZQV5 615 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 C9orf139Q6ZV77 190 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 BTN2A1Q7KYR7 527 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 SLC36A1Q7Z2H8 476 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 ACBD7Q8N6N7 88 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 PNLDC1Q8NA58 520 aaKnown RBP5.7□□□□□ -1.5
HMGN1-205ENST00000419378 POC1AQ8NBT0 407 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 CCDC54Q8NEL0 328 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 ZNF555Q8NEP9 628 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 OR2G2Q8NGZ5 317 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 ANGPTL6Q8NI99 470 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 ZFAND2BQ8WV99 257 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 TMIGD2Q96BF3 282 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 PELI1Q96FA3 418 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 C4orf36Q96KX1 117 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 Q96MT0 163 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 GAFA1Q96PS6 74 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 PCGF1Q9BSM1 259 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 THAP7Q9BT49 309 aaPredicted RBP5.7□□□□□ -1.5
HMGN1-205ENST00000419378 CHST5Q9GZS9 411 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms