RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SMN1Q16637 294 aaKnown RBP13.43□□□□□ -0.26
LINC00404-201ENST00000418660 LRRC36Q1X8D7 754 aa13.43□□□□□ -0.26
LINC00404-201ENST00000418660 TTC23Q5W5X9 447 aa13.43□□□□□ -0.26
LINC00404-201ENST00000418660 C17orf107Q6ZR85 190 aa13.43□□□□□ -0.26
LINC00404-201ENST00000418660 GDPD3Q7L5L3 318 aa13.43□□□□□ -0.26
LINC00404-201ENST00000418660 SERPINA12Q8IW75 414 aa13.43□□□□□ -0.26
LINC00404-201ENST00000418660 BEND2Q8NDZ0 799 aa13.43□□□□□ -0.26
LINC00404-201ENST00000418660 OR5D14Q8NGL3 314 aa13.43□□□□□ -0.26
LINC00404-201ENST00000418660 RBFOX1Q9NWB1 397 aaKnown RBP13.43□□□□□ -0.26
LINC00404-201ENST00000418660 IL36RNQ9UBH0 155 aa13.43□□□□□ -0.26
LINC00404-201ENST00000418660 VPREB3Q9UKI3 123 aa13.43□□□□□ -0.26
LINC00404-201ENST00000418660 IRGMA1A4Y4 181 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 CLPSL1A2RUU4 121 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 C17orf98A8MV24 154 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 PRKACAP17612 351 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 DCKP27707 260 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 DLX6P56179 175 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 EDDM3BP56851 147 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 MEF2CQ06413 473 aaPredicted RBP13.42□□□□□ -0.26
LINC00404-201ENST00000418660 ZNF146Q15072 292 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 SPIN3Q5JUX0 258 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 OLFML2AQ68BL7 652 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 PARP16Q8N5Y8 322 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 OR5R1Q8NH85 324 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 RFT1Q96AA3 541 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 PDCD1LG2Q9BQ51 273 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 MEGF9Q9H1U4 602 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 RHOFQ9HBH0 211 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 HMG20AQ9NP66 347 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 GLS2Q9UI32 602 aa13.42□□□□□ -0.26
LINC00404-201ENST00000418660 IGKV1-12A0A0C4DH73 117 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 KDM4BO94953 1096 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 CLIC3O95833 236 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 IGKV1D-12P01611 117 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 RBP4P02753 201 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 ZNF728P0DKX0 622 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 GABRR1P24046 479 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 PEX2P28328 305 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 DUSP1P28562 367 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 GTF2A1P52655 376 aaPredicted RBP13.41□□□□□ -0.26
LINC00404-201ENST00000418660 ADARB1P78563 741 aaKnown RBP13.41□□□□□ -0.26
LINC00404-201ENST00000418660 RCN1Q15293 331 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 RNF144BQ7Z419 303 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 SAXO1Q8IYX7 474 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 DHRSXQ8N5I4 330 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 ZSCAN4Q8NAM6 433 aaPredicted RBP13.41□□□□□ -0.26
LINC00404-201ENST00000418660 SETD9Q8NE22 299 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 OR52N4Q8NGI2 321 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 CNIH3Q8TBE1 160 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 CYGBQ8WWM9 190 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 AJUBAQ96IF1 538 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 SPACA5Q96QH8 159 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 ZNF696Q9H7X3 374 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 DHDHQ9UQ10 334 aa13.41□□□□□ -0.26
LINC00404-201ENST00000418660 hADV38S2A0JD32 116 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 SH2D1BO14796 132 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 SULT1B1O43704 296 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 PSPNO60542 156 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 HCKP08631 526 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 CALCBP10092 127 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 COX7A1P24310 79 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 ETV1P50549 477 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 EDDM3AQ14507 147 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 GRK1Q15835 563 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 CCDC58Q4VC31 144 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 PRR31Q5SQ13 230 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 RPL22L1Q6P5R6 122 aaKnown RBP13.4□□□□□ -0.26
LINC00404-201ENST00000418660 CRIP3Q6Q6R5 217 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 TMPRSS11AQ6ZMR5 421 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 ZNF782Q6ZMW2 699 aaPredicted RBP13.4□□□□□ -0.26
LINC00404-201ENST00000418660 PPP1R35Q8TAP8 253 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 TSEN15Q8WW01 171 aaKnown RBP13.4□□□□□ -0.26
LINC00404-201ENST00000418660 C17orf50Q8WW18 174 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 WFDC12Q8WWY7 111 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 SSX3Q99909 188 aa13.4□□□□□ -0.26
LINC00404-201ENST00000418660 MGST3O14880 152 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 TGFBR2P37173 567 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 BMXP51813 675 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 SNU13P55769 128 aaKnown RBP13.39□□□□□ -0.27
LINC00404-201ENST00000418660 LGALS4P56470 323 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 IL18R1Q13478 541 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 KISS1Q15726 138 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 AANATQ16613 207 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 DHRS7BQ6IAN0 325 aaPredicted RBP13.39□□□□□ -0.27
LINC00404-201ENST00000418660 TCF23Q7RTU1 214 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 OR4S1Q8NGB4 309 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 OR5D18Q8NGL1 313 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 OR13D1Q8NGV5 346 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 LINC01006Q8NI28 216 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 RPS4Y2Q8TD47 263 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 ZNF714Q96N38 554 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 CHST6Q9GZX3 395 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 EXOSC4Q9NPD3 245 aaKnown RBP13.39□□□□□ -0.27
LINC00404-201ENST00000418660 DIMT1Q9UNQ2 313 aaKnown RBP13.39□□□□□ -0.27
LINC00404-201ENST00000418660 GSTK1Q9Y2Q3 226 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 EXOSC1Q9Y3B2 195 aaKnown RBP13.39□□□□□ -0.27
LINC00404-201ENST00000418660 RNF114Q9Y508 228 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 PCDHGB5Q9Y5G0 923 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 LINC00312Q9Y6C7 94 aa13.39□□□□□ -0.27
LINC00404-201ENST00000418660 HSPE1-MOB4S4R3N1 261 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms