RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 SPIN3Q5JUX0 258 aa15.41■□□□□ 0.06
PTCD3-204ENST00000418628 BTNL3Q6UXE8 466 aa15.41■□□□□ 0.06
PTCD3-204ENST00000418628 TMEM91Q6ZNR0 172 aa15.41■□□□□ 0.06
PTCD3-204ENST00000418628 EMG1Q92979 244 aaKnown RBP15.41■□□□□ 0.06
PTCD3-204ENST00000418628 UPRTQ96BW1 309 aa15.41■□□□□ 0.06
PTCD3-204ENST00000418628 TMED9Q9BVK6 235 aa15.41■□□□□ 0.06
PTCD3-204ENST00000418628 IL36GQ9NZH8 169 aa15.41■□□□□ 0.06
PTCD3-204ENST00000418628 CKLFQ9UBR5 152 aa15.41■□□□□ 0.06
PTCD3-204ENST00000418628 LRRC42Q9Y546 428 aa15.41■□□□□ 0.06
PTCD3-204ENST00000418628 UCHL1P09936 223 aa15.4■□□□□ 0.06
PTCD3-204ENST00000418628 GABRA2P47869 451 aa15.4■□□□□ 0.06
PTCD3-204ENST00000418628 RPS25P62851 125 aaKnown RBP15.4■□□□□ 0.06
PTCD3-204ENST00000418628 TRAM1Q15629 374 aa15.4■□□□□ 0.06
PTCD3-204ENST00000418628 FAM27D1Q5T7N8 215 aa15.4■□□□□ 0.06
PTCD3-204ENST00000418628 ZNF773Q6PK81 442 aa15.4■□□□□ 0.06
PTCD3-204ENST00000418628 PRIMA1Q86XR5 153 aa15.4■□□□□ 0.06
PTCD3-204ENST00000418628 CDH26Q8IXH8 852 aa15.4■□□□□ 0.06
PTCD3-204ENST00000418628 SVOPQ8N4V2 548 aa15.4■□□□□ 0.06
PTCD3-204ENST00000418628 TEX29Q8N6K0 151 aa15.4■□□□□ 0.06
PTCD3-204ENST00000418628 FAM234AQ9H0X4 552 aa15.4■□□□□ 0.06
PTCD3-204ENST00000418628 PPIL3Q9H2H8 161 aaKnown RBP15.4■□□□□ 0.06
PTCD3-204ENST00000418628 AUP1Q9Y679 476 aa15.4■□□□□ 0.06
PTCD3-204ENST00000418628 A0A1W2PPK0 400 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 K7N7A8 449 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 MAGEB3O15480 346 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 LIPFP07098 398 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 HSMCR30P0CW71 290 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 CD37P11049 281 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 ADRA2CP18825 462 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 PSMA1P25786 263 aaKnown RBP15.39■□□□□ 0.05
PTCD3-204ENST00000418628 ZNF93P35789 620 aaPredicted RBP15.39■□□□□ 0.05
PTCD3-204ENST00000418628 OR3A4PP47883 348 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 COL10A1Q03692 680 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 KLF17Q5JT82 389 aaPredicted RBP15.39■□□□□ 0.05
PTCD3-204ENST00000418628 PNLDC1Q8NA58 520 aaKnown RBP15.39■□□□□ 0.05
PTCD3-204ENST00000418628 TMEM185AQ8NFB2 350 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 OR51T1Q8NGJ9 327 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 PHYHIPQ92561 330 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 NKX3-1Q99801 234 aaPredicted RBP15.39■□□□□ 0.05
PTCD3-204ENST00000418628 MRI1Q9BV20 369 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 SIRPDQ9H106 197 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 NDUFB11Q9NX14 153 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 OR14J1Q9UGF5 321 aa15.39■□□□□ 0.05
PTCD3-204ENST00000418628 TRBV23-1A0A0A0MS06 115 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 TMEM82A0PJX8 343 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 HAND1O96004 215 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 TK1P04183 234 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 CHRM2P08172 466 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 TMEM225BP0DP42 221 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 PRKACAP17612 351 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 GABRA5P31644 462 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 PTGFRP43088 359 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 MTNR1BP49286 362 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 FGF12P61328 243 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 KRTAP21-3Q3LHN1 58 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 CD200R1LQ6Q8B3 271 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 C17orf107Q6ZR85 190 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 LRRTM1Q86UE6 522 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 KIR3DL3Q8N743 410 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 NKAIN3Q8N8D7 197 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 TNFAIP8L1Q8WVP5 186 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 FCGR1BQ92637 280 aa15.38■□□□□ 0.05
PTCD3-204ENST00000418628 C1orf147Q96MC9 270 aaPredicted RBP15.38■□□□□ 0.05
PTCD3-204ENST00000418628 ELL3Q9HB65 397 aaPredicted RBP15.38■□□□□ 0.05
PTCD3-204ENST00000418628 INMTO95050 263 aa15.37■□□□□ 0.05
PTCD3-204ENST00000418628 LMO1P25800 156 aa15.37■□□□□ 0.05
PTCD3-204ENST00000418628 BMXP51813 675 aa15.37■□□□□ 0.05
PTCD3-204ENST00000418628 ARMCX4Q5H9R4 360 aa15.37■□□□□ 0.05
PTCD3-204ENST00000418628 NHLRC3Q5JS37 347 aa15.37■□□□□ 0.05
PTCD3-204ENST00000418628 Q6P435 159 aa15.37■□□□□ 0.05
PTCD3-204ENST00000418628 FIP1L1Q6UN15 594 aaKnown RBP15.37■□□□□ 0.05
PTCD3-204ENST00000418628 NANPQ8TBE9 248 aa15.37■□□□□ 0.05
PTCD3-204ENST00000418628 TBX15Q96SF7 602 aa15.37■□□□□ 0.05
PTCD3-204ENST00000418628 GPER1Q99527 375 aa15.37■□□□□ 0.05
PTCD3-204ENST00000418628 KPTNQ9Y664 436 aa15.37■□□□□ 0.05
PTCD3-204ENST00000418628 PSPNO60542 156 aa15.36■□□□□ 0.05
PTCD3-204ENST00000418628 RGS9O75916 674 aaPredicted RBP15.36■□□□□ 0.05
PTCD3-204ENST00000418628 FABP5Q01469 135 aa15.36■□□□□ 0.05
PTCD3-204ENST00000418628 CEACAM19Q7Z692 300 aa15.36■□□□□ 0.05
PTCD3-204ENST00000418628 SATL1Q86VE3 508 aa15.36■□□□□ 0.05
PTCD3-204ENST00000418628 OR8H2Q8N162 312 aa15.36■□□□□ 0.05
PTCD3-204ENST00000418628 TMEM203Q969S6 136 aa15.36■□□□□ 0.05
PTCD3-204ENST00000418628 SNX22Q96L94 193 aa15.36■□□□□ 0.05
PTCD3-204ENST00000418628 MEGF11A6BM72 1044 aa15.35■□□□□ 0.05
PTCD3-204ENST00000418628 CDRT1O95170 752 aa15.35■□□□□ 0.05
PTCD3-204ENST00000418628 MAS1P04201 325 aa15.35■□□□□ 0.05
PTCD3-204ENST00000418628 CALCBP10092 127 aa15.35■□□□□ 0.05
PTCD3-204ENST00000418628 NDUFB7P17568 137 aa15.35■□□□□ 0.05
PTCD3-204ENST00000418628 SRP14P37108 136 aaKnown RBP15.35■□□□□ 0.05
PTCD3-204ENST00000418628 IL13RA2Q14627 380 aa15.35■□□□□ 0.05
PTCD3-204ENST00000418628 HSD17B12Q53GQ0 312 aa15.35■□□□□ 0.05
PTCD3-204ENST00000418628 Q8N7P7 452 aa15.35■□□□□ 0.05
PTCD3-204ENST00000418628 WDFY2Q96P53 400 aa15.35■□□□□ 0.05
PTCD3-204ENST00000418628 UQCC2Q9BRT2 126 aa15.35■□□□□ 0.05
PTCD3-204ENST00000418628 CNTD2Q9H8S5 307 aa15.35■□□□□ 0.05
PTCD3-204ENST00000418628 UNKLQ9H9P5 680 aaKnown RBP15.35■□□□□ 0.05
PTCD3-204ENST00000418628 C19orf12Q9NSK7 152 aa15.35■□□□□ 0.05
PTCD3-204ENST00000418628 GSTK1Q9Y2Q3 226 aa15.35■□□□□ 0.05
PTCD3-204ENST00000418628 OR2H2O95918 312 aa15.34■□□□□ 0.05
PTCD3-204ENST00000418628 IGHV4-38-2P0DP08 117 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms