RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 BEX2Q9BXY8 128 aa7.22□□□□□ -1.25
USP54-203ENST00000418501 BEX1Q9HBH7 125 aa7.22□□□□□ -1.25
USP54-203ENST00000418501 RAXQ9Y2V3 346 aa7.22□□□□□ -1.25
USP54-203ENST00000418501 ATP23Q9Y6H3 246 aa7.22□□□□□ -1.25
USP54-203ENST00000418501 CPAMD8Q8IZJ3 1885 aa7.22□□□□□ -1.25
USP54-203ENST00000418501 MEIKINA0A087WXM9 373 aa7.21□□□□□ -1.25
USP54-203ENST00000418501 NKX6-3A6NJ46 265 aa7.21□□□□□ -1.25
USP54-203ENST00000418501 IFNA7P01567 189 aa7.21□□□□□ -1.25
USP54-203ENST00000418501 CHATP28329 748 aa7.21□□□□□ -1.25
USP54-203ENST00000418501 SPATA46Q5T0L3 261 aa7.21□□□□□ -1.25
USP54-203ENST00000418501 ST6GALNAC3Q8NDV1 305 aa7.21□□□□□ -1.25
USP54-203ENST00000418501 TINAGL1Q9GZM7 467 aaPredicted RBP7.21□□□□□ -1.25
USP54-203ENST00000418501 SH3BGRL2Q9UJC5 107 aa7.21□□□□□ -1.25
USP54-203ENST00000418501 TRAPPC2LQ9UL33 140 aa7.21□□□□□ -1.25
USP54-203ENST00000418501 IGHV2OR16-5A0A0B4J2B6 119 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 TMEM30CPA0ZSE6 113 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 PYCARD-AS1I3L0S3 204 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 GOSR2O14653 212 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 CECR9P0C854 216 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 PVALBP20472 110 aaPredicted RBP7.21□□□□□ -1.26
USP54-203ENST00000418501 ZNF767PQ75MW2 155 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 SLC25A42Q86VD7 318 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 WFDC8Q8IUA0 241 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 OR2T35Q8NGX2 323 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 ST8SIA4Q92187 359 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 S100PBPQ96BU1 408 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 GHITMQ9H3K2 345 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 KCNK15Q9H427 330 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 DYNLRB1Q9NP97 96 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 TREM2Q9NZC2 230 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 SLC25A15Q9Y619 301 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 L7N2F9 121 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 NGFP01138 241 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 CTSDP07339 412 aaPredicted RBP7.21□□□□□ -1.26
USP54-203ENST00000418501 SLC22A25Q6T423 547 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 C6orf201Q7Z4U5 140 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 SSC4DQ8WTU2 575 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 CASTOR1Q8WTX7 329 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 GCDHQ92947 438 aaPredicted RBP7.21□□□□□ -1.26
USP54-203ENST00000418501 MS4A3Q96HJ5 214 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 CHIAQ9BZP6 476 aa7.21□□□□□ -1.26
USP54-203ENST00000418501 RANGRFQ9HD47 186 aaPredicted RBP7.21□□□□□ -1.26
USP54-203ENST00000418501 A8MXE2 369 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 M0R233 179 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 TNFSF13O75888 250 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 IFNA2P01563 188 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 SULT1A3P0DMM9 295 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 SULT1A4P0DMN0 295 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 BCL3P20749 454 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 CALCRP30988 508 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 DHODHQ02127 395 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 ASPHD2Q6ICH7 369 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 OR2AK2Q8NG84 335 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 SUCNR1Q9BXA5 334 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 SSUH2Q9Y2M2 353 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 KCNK7Q9Y2U2 307 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 PTPRZ1P23471 2315 aaPredicted RBP7.2□□□□□ -1.26
USP54-203ENST00000418501 SSX4O60224 188 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 AGFG2O95081 481 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 IGLV1-44P01699 117 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 ANXA7P20073 488 aaKnown RBP7.2□□□□□ -1.26
USP54-203ENST00000418501 CHRNB4P30926 498 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 MOGAT2Q3SYC2 334 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 KCTD9Q7L273 389 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 OR5D13Q8NGL4 314 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 ZNF2Q9BSG1 426 aaPredicted RBP7.2□□□□□ -1.26
USP54-203ENST00000418501 SOX7Q9BT81 388 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 FAAP24Q9BTP7 215 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 DECR2Q9NUI1 292 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 AK3Q9UIJ7 227 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 A0A1W2PR80 420 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 TRDCB7Z8K6 153 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 GEMIN2O14893 280 aaKnown RBP7.2□□□□□ -1.26
USP54-203ENST00000418501 SPINT2O43291 252 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 DUS4LO95620 317 aaKnown RBP7.2□□□□□ -1.26
USP54-203ENST00000418501 WNT5AP41221 380 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 DOLPP1Q86YN1 238 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 WDR31Q8NA23 367 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 OR4A4PQ8NGN8 299 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 OR10J5Q8NHC4 309 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 ANGPTL6Q8NI99 470 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 FAM216AQ8WUB2 273 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 ZNF75AQ96N20 296 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 DPCDQ9BVM2 203 aaPredicted RBP7.2□□□□□ -1.26
USP54-203ENST00000418501 KCNJ16Q9NPI9 418 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 TAAR3PQ9P1P4 343 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 PCDHB10Q9UN67 800 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 CD3EP07766 207 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 IL2RGP31785 369 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 GZMKP49863 264 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 SHEQ5VZ18 495 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 EIF5AL1Q6IS14 154 aaKnown RBP7.2□□□□□ -1.26
USP54-203ENST00000418501 LGI3Q8N145 548 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 ASCC1Q8N9N2 400 aaKnown RBP7.2□□□□□ -1.26
USP54-203ENST00000418501 TMEM185AQ8NFB2 350 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 FBXW5Q969U6 566 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 OR51I2Q9H344 312 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 CA10Q9NS85 328 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 ANAPC10Q9UM13 185 aa7.2□□□□□ -1.26
USP54-203ENST00000418501 PRELID1Q9Y255 219 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms