RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 DACT3Q96B18 629 aaPredicted RBP19.14■□□□□ 0.65
SMARCB1-205ENST00000417137 FAM192AQ9GZU8 254 aa19.14■□□□□ 0.65
SMARCB1-205ENST00000417137 SLITRK2Q9H156 845 aa19.14■□□□□ 0.65
SMARCB1-205ENST00000417137 ELL3Q9HB65 397 aaPredicted RBP19.14■□□□□ 0.65
SMARCB1-205ENST00000417137 PCDHB16Q9NRJ7 776 aa19.14■□□□□ 0.65
SMARCB1-205ENST00000417137 SH2D1BO14796 132 aa19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 SC5DO75845 299 aa19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 FAM157CP0CG43 387 aa19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 GABRA5P31644 462 aa19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 MTNR1BP49286 362 aa19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 SCGB2A2Q13296 93 aa19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 ZNF146Q15072 292 aa19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 RSU1Q15404 277 aa19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 HSD17B12Q53GQ0 312 aa19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 NKAIN3Q8N8D7 197 aa19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 NANPQ8TBE9 248 aa19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 H1FXQ92522 213 aaKnown RBP19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 FAM234AQ9H0X4 552 aa19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 METTL9Q9H1A3 318 aa19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 CNTD2Q9H8S5 307 aa19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 RPUSD1Q9UJJ7 312 aaKnown RBP19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 ING4Q9UNL4 249 aa19.13■□□□□ 0.65
SMARCB1-205ENST00000417137 FCN3O75636 299 aa19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 ARL6IP5O75915 188 aa19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 RGS9O75916 674 aaPredicted RBP19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 TNFAIP8O95379 198 aa19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 HAND1O96004 215 aa19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 SFTPBP07988 381 aa19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 PPIAL4GP0DN37 164 aa19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 SELLP14151 372 aa19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 CEBPDP49716 269 aaPredicted RBP19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 RPS25P62851 125 aaKnown RBP19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 COL10A1Q03692 680 aa19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 INSL4Q14641 139 aa19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 ELP2Q6IA86 826 aa19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 ASCL4Q6XD76 172 aa19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 JAGN1Q8N5M9 183 aa19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 DCTN5Q9BTE1 182 aa19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 OPN4Q9UHM6 478 aa19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 GSTK1Q9Y2Q3 226 aa19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 SF3B6Q9Y3B4 125 aaKnown RBP19.12■□□□□ 0.65
SMARCB1-205ENST00000417137 FN1P02751 2386 aaKnown RBP19.11■□□□□ 0.65
SMARCB1-205ENST00000417137 ZNF780AO75290 641 aaPredicted RBP19.11■□□□□ 0.65
SMARCB1-205ENST00000417137 AVPP01185 164 aa19.11■□□□□ 0.65
SMARCB1-205ENST00000417137 UCHL1P09936 223 aa19.11■□□□□ 0.65
SMARCB1-205ENST00000417137 SRMP19623 302 aa19.11■□□□□ 0.65
SMARCB1-205ENST00000417137 PSMB9P28065 219 aa19.11■□□□□ 0.65
SMARCB1-205ENST00000417137 OR3A4PP47883 348 aa19.11■□□□□ 0.65
SMARCB1-205ENST00000417137 C1QL2Q7Z5L3 287 aa19.11■□□□□ 0.65
SMARCB1-205ENST00000417137 ASCC1Q8N9N2 400 aaKnown RBP19.11■□□□□ 0.65
SMARCB1-205ENST00000417137 OR5D13Q8NGL4 314 aa19.11■□□□□ 0.65
SMARCB1-205ENST00000417137 FOXRED1Q96CU9 486 aaPredicted RBP19.11■□□□□ 0.65
SMARCB1-205ENST00000417137 TRBV23-1A0A0A0MS06 115 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 K7N7A8 449 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 CCRL2O00421 344 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 IFNA2P01563 188 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 CSTBP04080 98 aaKnown RBP19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 TK1P04183 234 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 CALCBP10092 127 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 FGF12P61328 243 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 GPR176Q14439 515 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 C1orf229Q6ZS94 237 aaPredicted RBP19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 FGFRL1Q8N441 504 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 LY6G5BQ8NDX9 201 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 C8orf46Q8TAG6 207 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 PPP1R35Q8TAP8 253 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 TBC1D15Q8TC07 691 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 SNX22Q96L94 193 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 UQCC2Q9BRT2 126 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 EXOSC4Q9NPD3 245 aaKnown RBP19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 IL36GQ9NZH8 169 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 METRNQ9UJH8 293 aa19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 SONP18583 2426 aaKnown RBP19.1■□□□□ 0.65
SMARCB1-205ENST00000417137 NSD1Q96L73 2696 aaPredicted RBP19.09■□□□□ 0.65
SMARCB1-205ENST00000417137 MAGEA13PA6NCF6 341 aa19.09■□□□□ 0.65
SMARCB1-205ENST00000417137 DUSP1P28562 367 aa19.09■□□□□ 0.65
SMARCB1-205ENST00000417137 SNU13P55769 128 aaKnown RBP19.09■□□□□ 0.65
SMARCB1-205ENST00000417137 SSX1Q16384 188 aa19.09■□□□□ 0.65
SMARCB1-205ENST00000417137 FAM27D1Q5T7N8 215 aa19.09■□□□□ 0.65
SMARCB1-205ENST00000417137 METTL11BQ5VVY1 283 aa19.09■□□□□ 0.65
SMARCB1-205ENST00000417137 GLT8D1Q68CQ7 371 aa19.09■□□□□ 0.65
SMARCB1-205ENST00000417137 TMEM91Q6ZNR0 172 aa19.09■□□□□ 0.65
SMARCB1-205ENST00000417137 CMTM4Q8IZR5 234 aa19.09■□□□□ 0.65
SMARCB1-205ENST00000417137 NDUFB11Q9NX14 153 aa19.09■□□□□ 0.65
SMARCB1-205ENST00000417137 IL36RNQ9UBH0 155 aa19.09■□□□□ 0.65
SMARCB1-205ENST00000417137 A0A1W2PPH5 198 aa19.08■□□□□ 0.64
SMARCB1-205ENST00000417137 A0A1W2PQ09 198 aa19.08■□□□□ 0.64
SMARCB1-205ENST00000417137 CDRT1O95170 752 aa19.08■□□□□ 0.64
SMARCB1-205ENST00000417137 HTR3BO95264 441 aa19.08■□□□□ 0.64
SMARCB1-205ENST00000417137 GP2P55259 537 aaKnown RBP19.08■□□□□ 0.64
SMARCB1-205ENST00000417137 FABP5Q01469 135 aa19.08■□□□□ 0.64
SMARCB1-205ENST00000417137 CHST4Q8NCG5 386 aa19.08■□□□□ 0.64
SMARCB1-205ENST00000417137 Q8NFD4 153 aa19.08■□□□□ 0.64
SMARCB1-205ENST00000417137 MRPS28Q9Y2Q9 187 aaKnown RBP19.08■□□□□ 0.64
SMARCB1-205ENST00000417137 KPTNQ9Y664 436 aa19.08■□□□□ 0.64
SMARCB1-205ENST00000417137 A0A087WXM4 84 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 DEGS1O15121 323 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 ZNF737O75373 536 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 TOX4O94842 621 aa19.07■□□□□ 0.64
SMARCB1-205ENST00000417137 ADRA2CP18825 462 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms