RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 ZNF596Q8TC21 504 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 CHID1Q9BWS9 393 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 TEX12Q9BXU0 123 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 CADM1Q9BY67 442 aaKnown RBP12.23□□□□□ -0.45
DDX56-202ENST00000415758 ZNF556Q9HAH1 456 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 SNX5Q9Y5X3 404 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 KIAA2026Q5HYC2 2103 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 IGKV1-27A0A075B6S5 117 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 MGST3O14880 152 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 HAND1O96004 215 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 CD34P28906 385 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 FUT6P51993 359 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 CXCR4P61073 352 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 ZNF146Q15072 292 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 UBE2V2Q15819 145 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 SNAPC1Q16533 368 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 KHDC1LQ5JSQ8 128 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 ZNF322Q6U7Q0 402 aaPredicted RBP12.22□□□□□ -0.45
DDX56-202ENST00000415758 HEPN1Q6WQI6 88 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 RNF144BQ7Z419 303 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 Q8IYB0 196 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 CORO2AQ92828 525 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 SLAMF9Q96A28 289 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 CREB3L1Q96BA8 519 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 MNTQ99583 582 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 APOL4Q9BPW4 351 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 TTTY10Q9BZA0 68 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 PAPOLBQ9NRJ5 636 aaKnown RBP12.22□□□□□ -0.45
DDX56-202ENST00000415758 GTF2A1LQ9UNN4 478 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 PCDHGB5Q9Y5G0 923 aa12.22□□□□□ -0.45
DDX56-202ENST00000415758 PSMB11A5LHX3 300 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 LY6LH3BQJ8 138 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 ANXA8P13928 327 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 GABRR1P24046 479 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 CEACAM3P40198 252 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 P2RX3P56373 397 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 ZNF91Q05481 1191 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 BAIAP2L2Q6UXY1 529 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 SLC25A26Q70HW3 274 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 CNN2Q99439 309 aaKnown RBP12.21□□□□□ -0.45
DDX56-202ENST00000415758 CHST6Q9GZX3 395 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 FAM107BQ9H098 131 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 GAL3ST2Q9H3Q3 398 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 ZFP57Q9NU63 452 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 TAS2R3Q9NYW6 316 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 TVP23BQ9NYZ1 205 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 MRM2Q9UI43 246 aaKnown RBP12.21□□□□□ -0.45
DDX56-202ENST00000415758 U3KQK5 164 aa12.21□□□□□ -0.45
DDX56-202ENST00000415758 SH2D7A6NKC9 451 aaPredicted RBP12.2□□□□□ -0.46
DDX56-202ENST00000415758 OOSP1A8MZH6 123 aa12.2□□□□□ -0.46
DDX56-202ENST00000415758 B2RBV5 119 aa12.2□□□□□ -0.46
DDX56-202ENST00000415758 BUB1B-PAK6H3BSN5 160 aa12.2□□□□□ -0.46
DDX56-202ENST00000415758 MAGEB4O15481 346 aaPredicted RBP12.2□□□□□ -0.46
DDX56-202ENST00000415758 PRKACGP22612 351 aa12.2□□□□□ -0.46
DDX56-202ENST00000415758 MYCNOSP40205 109 aa12.2□□□□□ -0.46
DDX56-202ENST00000415758 CDC42P60953 191 aa12.2□□□□□ -0.46
DDX56-202ENST00000415758 RPL23AP62750 156 aaKnown RBP12.2□□□□□ -0.46
DDX56-202ENST00000415758 DGCR2P98153 550 aa12.2□□□□□ -0.46
DDX56-202ENST00000415758 SPIN3Q5JUX0 258 aa12.2□□□□□ -0.46
DDX56-202ENST00000415758 UNQ9370/PRO34162Q6UXP9 181 aa12.2□□□□□ -0.46
DDX56-202ENST00000415758 THNSL2Q86YJ6 484 aa12.2□□□□□ -0.46
DDX56-202ENST00000415758 ADGRG5Q8IZF4 528 aa12.2□□□□□ -0.46
DDX56-202ENST00000415758 BCAS4Q8TDM0 211 aa12.2□□□□□ -0.46
DDX56-202ENST00000415758 EMG1Q92979 244 aaKnown RBP12.2□□□□□ -0.46
DDX56-202ENST00000415758 ASB9Q96DX5 294 aa12.2□□□□□ -0.46
DDX56-202ENST00000415758 P2RX4Q99571 388 aa12.2□□□□□ -0.46
DDX56-202ENST00000415758 IL36RNQ9UBH0 155 aa12.2□□□□□ -0.46
DDX56-202ENST00000415758 A0A087X0M5 115 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 TRBV2A0A0J9YWF9 115 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 A0A1B0GX30 115 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 FAM90A18PA6NE21 464 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 FAM90A16PA6NEW6 464 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 FAM90A20PA6NIJ5 464 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 FAM90A9PA6NNJ1 464 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 FAM90A12PA8MX19 464 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 FAM90A5PA8MXJ8 464 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 H0YHG0 523 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 GNGT2O14610 69 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 RAMP3O60896 148 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 GATBO75879 557 aaKnown RBP12.19□□□□□ -0.46
DDX56-202ENST00000415758 DCTN3O75935 186 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 CCDC159P0C7I6 412 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 FAM90A15PP0C7V4 464 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 FAM90A13PP0C7W8 464 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 FAM90A14PP0C7W9 464 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 FAM90A24PP0C7X0 464 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 HOXB6P17509 224 aaKnown RBP12.19□□□□□ -0.46
DDX56-202ENST00000415758 CDK2P24941 298 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 OR3A1P47881 315 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 HLA-DRB5Q30154 266 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 TPTE2P1Q5T6R2 138 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 CCDC144NLQ6NUI1 221 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 PLEKHG7Q6ZR37 379 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 MEPCEQ7L2J0 689 aaKnown RBP12.19□□□□□ -0.46
DDX56-202ENST00000415758 OR2W3Q7Z3T1 314 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 TRAPPC6BQ86SZ2 158 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 SLC35F2Q8IXU6 374 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 HS3ST5Q8IZT8 346 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 FAM58AQ8N1B3 248 aa12.19□□□□□ -0.46
DDX56-202ENST00000415758 CCDC54Q8NEL0 328 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms