RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 IKZF1Q13422 519 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 MPPED2Q15777 294 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 WDR82Q6UXN9 313 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 MEX3BQ6ZN04 569 aaKnown RBP12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 TRAPPC6BQ86SZ2 158 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 BATF2Q8N1L9 274 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 CHPT1Q8WUD6 406 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 LRRC29Q8WV35 223 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 GTF3AQ92664 365 aaKnown RBP12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 NEUROG1Q92886 237 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 HPS1Q92902 700 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 TRIM63Q969Q1 353 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 ZNF488Q96MN9 340 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 PLEKHA6Q9Y2H5 1048 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 CACNG2Q9Y698 323 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 IGHV3-64DA0A0J9YX35 117 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 ANKRD20A5PA0PJZ0 165 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 LRRC30A6NM36 301 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 IFNL4K9M1U5 179 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 PLA2G10O15496 165 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 SIAH2O43255 324 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 LANCL1O43813 399 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 LOXP28300 417 aaPredicted RBP12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 CHATP28329 748 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 GUCA2AQ02747 115 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 ZNF146Q15072 292 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 SMIM21Q3B7S5 101 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 AGAP6Q5VW22 663 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 ZNF826PQ6ZT77 177 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 C6orf201Q7Z4U5 140 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 MOGAT3Q86VF5 341 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 FAM90A1Q86YD7 464 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 TMEM229BQ8NBD8 167 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 LILRB1Q8NHL6 650 aaPredicted RBP12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 ENKURQ8TC29 256 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 ST8SIA4Q92187 359 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 GCDHQ92947 438 aaPredicted RBP12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 HS3ST6Q96QI5 342 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 CMSS1Q9BQ75 279 aaKnown RBP12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 OCSTAMPQ9BR26 566 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 FAAP24Q9BTP7 215 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 RNF7Q9UBF6 113 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 TBC1D24Q9ULP9 559 aa12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 SPENQ96T58 3664 aaKnown RBP12.06□□□□□ -0.48
HMGA1P1-201ENST00000415560 NBEAQ8NFP9 2946 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 FAM240BA0A1B0GVZ2 78 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 F8VVB4 439 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 F8VWA3 439 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 C19orf84I3L1E1 186 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 AKAIN1P0CW23 69 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 ZNF44P15621 663 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 IGFBP2P18065 325 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 OXA1LQ15070 435 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 SWI5Q1ZZU3 235 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 ACP7Q6ZNF0 438 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 C1orf87Q8N0U7 546 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 CENPSQ8N2Z9 138 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 Q8TCH9 128 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 NEK7Q8TDX7 302 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 CHST6Q9GZX3 395 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 C11orf54Q9H0W9 315 aaPredicted RBP12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 RIMS4Q9H426 269 aaPredicted RBP12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 IFT22Q9H7X7 185 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 SAP30LQ9HAJ7 183 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 HES4Q9HCC6 221 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 CBLN4Q9NTU7 201 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 DNAJB11Q9UBS4 358 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 EDARQ9UNE0 448 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 PPP1R3CQ9UQK1 317 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 NPTNQ9Y639 398 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 CADP27708 2225 aa12.05□□□□□ -0.48
HMGA1P1-201ENST00000415560 MEIS3P1A6NDR6 274 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 SRRM5B3KS81 715 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 H7C1Q1 480 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 HS3ST1O14792 307 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 KNG1P01042 644 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 MDH2P40926 338 aaKnown RBP12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 PPOXP50336 477 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 GMFBP60983 142 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 CCL8P80075 99 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 KLF9Q13886 244 aaPredicted RBP12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 PDCD1Q15116 288 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 MST1LQ2TV78 715 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 SIGIRRQ6IA17 410 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 DCDC5Q6ZRR9 648 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 NUDCD2Q8WVJ2 157 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 SPOCK3Q9BQ16 436 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 RAB1BQ9H0U4 201 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 DPAGT1Q9H3H5 408 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 SEBOXQ9HB31 216 aaPredicted RBP12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 GCM1Q9NP62 436 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 COPZ2Q9P299 210 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 ELF5Q9UKW6 265 aaPredicted RBP12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 KCNK7Q9Y2U2 307 aa12.04□□□□□ -0.48
HMGA1P1-201ENST00000415560 CHD3Q12873 2000 aaKnown RBP12.03□□□□□ -0.48
HMGA1P1-201ENST00000415560 UBE2QL1A1L167 161 aa12.03□□□□□ -0.48
HMGA1P1-201ENST00000415560 A6NNC1 897 aa12.03□□□□□ -0.48
HMGA1P1-201ENST00000415560 ZNF736B4DX44 427 aaPredicted RBP12.03□□□□□ -0.48
HMGA1P1-201ENST00000415560 TBPP20226 339 aa12.03□□□□□ -0.48
HMGA1P1-201ENST00000415560 DTYMKP23919 212 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms