RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 OR1M1Q8NGA1 313 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 OR11L1Q8NGX0 322 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 NPRL2Q8WTW4 380 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 HPSE2Q8WWQ2 592 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 RORBQ92753 470 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 RPL3LQ92901 407 aaKnown RBP4.06□□□□□ -1.76
VPS41-205ENST00000414632 SEH1LQ96EE3 360 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 TMEM246Q9BRR3 403 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 BEX2Q9BXY8 128 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 SHARPINQ9H0F6 387 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 SP140LQ9H930 580 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 ISG20L2Q9H9L3 353 aaKnown RBP4.06□□□□□ -1.76
VPS41-205ENST00000414632 FN3KRPQ9HA64 309 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 GPR173Q9NS66 373 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 HIF1ANQ9NWT6 349 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 HAO2Q9NYQ3 351 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 NUFIP1Q9UHK0 495 aaKnown RBP4.06□□□□□ -1.76
VPS41-205ENST00000414632 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.06□□□□□ -1.76
VPS41-205ENST00000414632 PIGLQ9Y2B2 252 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 MYRFQ9Y2G1 1151 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 PPIAL4AQ9Y536 164 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 SNX5Q9Y5X3 404 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 R4GMQ9 66 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 A3GALT2U3KPV4 340 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 NAV3Q8IVL0 2385 aa4.06□□□□□ -1.76
VPS41-205ENST00000414632 JMJD1CQ15652 2540 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 LOC105371242A0A075B767 164 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 A0A0U1RQV5 110 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 ZNF816-ZNF321PA0A0X1KG74 233 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 A0A1B0GTI1 187 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 A0A1B0GW55 424 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 LOC107986453A0A1B0GWG9 222 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 A0A1B0GWJ7 208 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 ANXA2P2A6NMY6 339 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 B4DSR2 109 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 ZNF732B4DXR9 585 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 J3QRE1 110 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 CDIPTO14735 213 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 AKR7A2O43488 359 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 GMDSO60547 372 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 IGLV3-1P01715 115 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 GYPAP02724 150 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 MSMBP08118 114 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 GNAO1P09471 354 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 OR2T7P0C7T2 308 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 DUX4L2P0CJ85 424 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 DUX4L3P0CJ86 424 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 DUX4L4P0CJ87 422 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 DUX4L5P0CJ88 424 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 DUX4L6P0CJ89 424 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 DUX4L7P0CJ90 424 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 CFL1P23528 166 aaKnown RBP4.05□□□□□ -1.76
VPS41-205ENST00000414632 MDH2P40926 338 aaKnown RBP4.05□□□□□ -1.76
VPS41-205ENST00000414632 GPM6AP51674 278 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 AQP4P55087 323 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 NANOS3P60323 173 aaKnown RBP4.05□□□□□ -1.76
VPS41-205ENST00000414632 ACTC1P68032 377 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 ACTA1P68133 377 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 ADARB1P78563 741 aaKnown RBP4.05□□□□□ -1.76
VPS41-205ENST00000414632 ZNF154Q13106 437 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 TMED1Q13445 227 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 CHRFAM7AQ494W8 412 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 ESCO2Q56NI9 601 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 WDR38Q5JTN6 314 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 C6orf141Q5SZD1 244 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 ZNF684Q5T5D7 378 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 OGFRL1Q5TC84 451 aaPredicted RBP4.05□□□□□ -1.76
VPS41-205ENST00000414632 MEDAGQ5VYS4 303 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 PLCXD3Q63HM9 321 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 SUMO4Q6EEV6 95 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 FAHD2BQ6P2I3 314 aaPredicted RBP4.05□□□□□ -1.76
VPS41-205ENST00000414632 DEGS2Q6QHC5 323 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 DUX4L9Q6RFH8 374 aaPredicted RBP4.05□□□□□ -1.76
VPS41-205ENST00000414632 WDR82Q6UXN9 313 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 GLCCI1Q86VQ1 547 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 LRRC28Q86X40 367 aaPredicted RBP4.05□□□□□ -1.76
VPS41-205ENST00000414632 C11orf53Q8IXP5 236 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 ELMOD2Q8IZ81 293 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 FGFRL1Q8N441 504 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 DHRSXQ8N5I4 330 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 SPICQ8N5J4 248 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 GCSAMQ8N6F7 178 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 SCCPDHQ8NBX0 429 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 CSNK2A3Q8NEV1 391 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 SEMA6DQ8NFY4 1073 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 OR5T2Q8NGG2 359 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 OR52I1Q8NGK6 324 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 OR2T27Q8NH04 317 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 OR10AC1Q8NH08 325 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 OR51F2Q8NH61 342 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 RHOXF1Q8NHV9 184 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 TRMT10AQ8TBZ6 339 aaKnown RBP4.05□□□□□ -1.76
VPS41-205ENST00000414632 LRRC29Q8WV35 223 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 TRUB1Q8WWH5 349 aaKnown RBP4.05□□□□□ -1.76
VPS41-205ENST00000414632 OR5P3Q8WZ94 311 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 SNAPC3Q92966 411 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 TMEM186Q96B77 213 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 RAB39BQ96DA2 213 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 FAHD2AQ96GK7 314 aa4.05□□□□□ -1.76
VPS41-205ENST00000414632 RNF170Q96K19 258 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms