RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ARL6IP1Q15041 203 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 PNLIPRP3Q17RR3 467 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 MPV17LQ2QL34 196 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 TRIM16LQ309B1 348 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 PCGF3Q3KNV8 242 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 SPRNQ5BIV9 151 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 NKAPLQ5M9Q1 402 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 DCDC5Q6ZRR9 648 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 ZNF826PQ6ZT77 177 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 C6orf201Q7Z4U5 140 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 TRAPPC6BQ86SZ2 158 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 FAM58AQ8N1B3 248 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 CENPSQ8N2Z9 138 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 MINDY2Q8NBR6 621 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 FAM222BQ8WU58 562 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 ITLN1Q8WWA0 313 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 NEDD4LQ96PU5 975 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 DIRC2Q96SL1 478 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 DHRS9Q9BPW9 319 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 IFT22Q9H7X7 185 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 FN3KRPQ9HA64 309 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 UFSP2Q9NUQ7 469 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 C1orf123Q9NWV4 160 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 CISD1Q9NZ45 108 aaKnown RBP5.62□□□□□ -1.51
VPS41-204ENST00000413141 RCC2Q9P258 522 aaKnown RBP5.62□□□□□ -1.51
VPS41-204ENST00000413141 MTFP1Q9UDX5 166 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 IL19Q9UHD0 177 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 ANAPC10Q9UM13 185 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 CACNG2Q9Y698 323 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 DIDO1Q9BTC0 2240 aaKnown RBP5.62□□□□□ -1.51
VPS41-204ENST00000413141 DOPEY1Q5JWR5 2465 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 hCG_1807616A0A1W2PRN6 198 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 SRRM5B3KS81 715 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 B9A039 149 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 PRSS44E7EML9 344 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 WNT9BO14905 357 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 TPD52L2O43399 206 aaKnown RBP5.61□□□□□ -1.51
VPS41-204ENST00000413141 RBBP9O75884 186 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 MT-ND4P03905 459 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 GSTT2BP0CG30 244 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 SPNP16150 400 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 EGR1P18146 543 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 RCVRNP35243 200 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 CFHR2P36980 270 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 GMFBP60983 142 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 SNRPD2P62316 118 aaKnown RBP5.61□□□□□ -1.51
VPS41-204ENST00000413141 HOXA4Q00056 320 aaPredicted RBP5.61□□□□□ -1.51
VPS41-204ENST00000413141 IKZF1Q13422 519 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 DYRK1AQ13627 763 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 ZNF146Q15072 292 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 PDCD1Q15116 288 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 TESK1Q15569 626 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 MST1LQ2TV78 715 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 SMIM21Q3B7S5 101 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 SPIN3Q5JUX0 258 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 FAM209AQ5JX71 171 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 MZT2BQ6NZ67 158 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 FIP1L1Q6UN15 594 aaKnown RBP5.61□□□□□ -1.51
VPS41-204ENST00000413141 ACP7Q6ZNF0 438 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 GDPD3Q7L5L3 318 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 NRARPQ7Z6K4 114 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 MOGAT3Q86VF5 341 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 MUC15Q8N387 334 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 GCSAMQ8N6F7 178 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 OR10Z1Q8NGY1 313 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 Q8TCH9 128 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 LRRC29Q8WV35 223 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 DEDD2Q8WXF8 326 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 DYRK2Q92630 601 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 FBXW5Q969U6 566 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 COX4I2Q96KJ9 171 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 SULT4A1Q9BR01 284 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 C7orf50Q9BRJ6 194 aaKnown RBP5.61□□□□□ -1.51
VPS41-204ENST00000413141 WDR13Q9H1Z4 485 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 HEATR1Q9H583 2144 aaKnown RBP5.61□□□□□ -1.51
VPS41-204ENST00000413141 DYNLRB1Q9NP97 96 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 IFT46Q9NQC8 304 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 PLEKHJ1Q9NW61 149 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 TAS2R8Q9NYW2 309 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 PLCE1Q9P212 2302 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 ZNF107Q9UII5 783 aaPredicted RBP5.61□□□□□ -1.51
VPS41-204ENST00000413141 AK3Q9UIJ7 227 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 PLEKHA6Q9Y2H5 1048 aa5.61□□□□□ -1.51
VPS41-204ENST00000413141 KLF2Q9Y5W3 355 aaPredicted RBP5.61□□□□□ -1.51
VPS41-204ENST00000413141 TRAV24A0A0B4J272 114 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 A0A1B0GVG6 124 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 A0A1W2PPR1 153 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 A6NNC1 897 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 CENPXA8MT69 81 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 H3BUI4 141 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.6□□□□□ -1.51
VPS41-204ENST00000413141 HS3ST1O14792 307 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 OR2H2O95918 312 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 KNG1P01042 644 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 CD74P04233 296 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 FCER2P06734 321 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 ZNF44P15621 663 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 TNFRSF1AP19438 455 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 FUT3P21217 361 aa5.6□□□□□ -1.51
VPS41-204ENST00000413141 GLRA1P23415 457 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms