RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 KRCC1Q9NPI7 259 aaPredicted RBP4.54□□□□□ -1.68
LINC00342-201ENST00000412393 NRIP3Q9NQ35 241 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 HINT3Q9NQE9 182 aaKnown RBP4.54□□□□□ -1.68
LINC00342-201ENST00000412393 CBLN4Q9NTU7 201 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 B3GAT1Q9P2W7 334 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 MTFP1Q9UDX5 166 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 RCE1Q9Y256 329 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 B3GALT5Q9Y2C3 310 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 MRPS7Q9Y2R9 242 aaKnown RBP4.54□□□□□ -1.68
LINC00342-201ENST00000412393 HIVEP2P31629 2446 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 ABCA2Q9BZC7 2435 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 TRBV6-7A0A0A0MS04 114 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 A0A0B4J2E0 115 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 A0A1B0GTI1 187 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 LOC102725191A0A1B0GVB3 256 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 A0A1B0GX12 115 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 DAPL1A0PJW8 107 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 OR6C68A6NDL8 312 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 IFITM5A6NNB3 132 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 MS4A18H0YCH9 400 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 M0R3H8 397 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 TRAF3IP2O43734 574 aaPredicted RBP4.53□□□□□ -1.68
LINC00342-201ENST00000412393 UPK3AO75631 287 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 ZNF432O94892 652 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 IGHV4-39P01824 125 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 BGLAPP02818 100 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 CD3GP09693 182 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 CD79AP11912 226 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 PAICSP22234 425 aaKnown RBP4.53□□□□□ -1.68
LINC00342-201ENST00000412393 FAUP35544 74 aaKnown RBP4.53□□□□□ -1.68
LINC00342-201ENST00000412393 SRP9P49458 86 aaKnown RBP4.53□□□□□ -1.68
LINC00342-201ENST00000412393 UBE2NP61088 152 aaKnown RBP4.53□□□□□ -1.68
LINC00342-201ENST00000412393 ACTA2P62736 377 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 ACTG2P63267 376 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 ARF1P84077 181 aaKnown RBP4.53□□□□□ -1.68
LINC00342-201ENST00000412393 CDK5R1Q15078 307 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 RBMS2Q15434 407 aaKnown RBP4.53□□□□□ -1.68
LINC00342-201ENST00000412393 PNLIPRP3Q17RR3 467 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 MS4A18Q3C1V0 323 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 DNLZQ5SXM8 178 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 C11orf71Q6IPW1 123 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 ANKRD16Q6P6B7 361 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 ZNF613Q6PF04 617 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 ATRAIDQ6UW56 229 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 DRAM2Q6UX65 266 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 H1FNTQ75WM6 255 aaPredicted RBP4.53□□□□□ -1.68
LINC00342-201ENST00000412393 CPOQ8IVL8 374 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 UEVLDQ8IX04 471 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 MUC15Q8N387 334 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 GPR137CQ8N3F9 429 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 C10orf53Q8N6V4 93 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 ADPRHL1Q8NDY3 354 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 OR2AK2Q8NG84 335 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 OR6S1Q8NH40 331 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 STOML3Q8TAV4 291 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 THRSPQ92748 146 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 GHSRQ92847 366 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 HAVCR1Q96D42 359 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 SMIM19Q96E16 107 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 SLC41A3Q96GZ6 507 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 BOD1Q96IK1 185 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 CXorf58Q96LI9 332 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 MCHR1Q99705 422 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 SLC25A21Q9BQT8 299 aaPredicted RBP4.53□□□□□ -1.68
LINC00342-201ENST00000412393 SEC11CQ9BY50 192 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 KRTAP2-2Q9BYT5 123 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 EGLN3Q9H6Z9 239 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 ISG20L2Q9H9L3 353 aaKnown RBP4.53□□□□□ -1.68
LINC00342-201ENST00000412393 SEBOXQ9HB31 216 aaPredicted RBP4.53□□□□□ -1.68
LINC00342-201ENST00000412393 TMEM138Q9NPI0 162 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 MOKQ9UQ07 419 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 NIPBLQ6KC79 2804 aaeCLIP4.53□□□□□ -1.68
LINC00342-201ENST00000412393 MALRD1Q5VYJ5 2156 aa4.53□□□□□ -1.68
LINC00342-201ENST00000412393 NSD1Q96L73 2696 aaPredicted RBP4.52□□□□□ -1.69
LINC00342-201ENST00000412393 A0A0A6YYH2 397 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 IGHV1-18A0A0C4DH31 117 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 LOC390937A0A1W2PQ73 354 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 A6NJ64 397 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 CPSF4LA6NMK7 179 aaKnown RBP4.52□□□□□ -1.69
LINC00342-201ENST00000412393 ZNF726A6NNF4 738 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 INAFM1C9JVW0 142 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 F5H5P2 479 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 F8VVB4 439 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 F8VWA3 439 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 RPL36A-HNRNPH2H7BZ11 118 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 PLPP3O14495 311 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 XRCC3O43542 346 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 KHDRBS3O75525 346 aaKnown RBP4.52□□□□□ -1.69
LINC00342-201ENST00000412393 OR6A2O95222 327 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 LYPD3O95274 346 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 IGF2P01344 180 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 CRYAAP02489 173 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 APOC3P02656 99 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 S100A9P06702 114 aaKnown RBP4.52□□□□□ -1.69
LINC00342-201ENST00000412393 HLA-DOBP13765 273 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 RPS2P15880 293 aaKnown RBP4.52□□□□□ -1.69
LINC00342-201ENST00000412393 SRMP19623 302 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 S100PP25815 95 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 MAS1LP35410 378 aa4.52□□□□□ -1.69
LINC00342-201ENST00000412393 ATP6V1E1P36543 226 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms