RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 LEG1Q6P5S2 330 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 TRIM40Q6P9F5 258 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 SPSB3Q6PJ21 355 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 C19orf35Q6ZS72 473 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 ZNF621Q6ZSS3 439 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 AMIGO3Q86WK7 504 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 ZNF709Q8N972 641 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 ADAD2Q8NCV1 583 aaKnown RBP4.57□□□□□ -1.68
HERC4-205ENST00000412272 ZNF417Q8TAU3 575 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 TSPAN32Q96QS1 320 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 RASL10BQ96S79 203 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 ASCL2Q99929 193 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 CTDSP1Q9GZU7 261 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 EIF5A2Q9GZV4 153 aaKnown RBP4.57□□□□□ -1.68
HERC4-205ENST00000412272 OBP2BQ9NPH6 170 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 COMMD9Q9P000 198 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 GPR132Q9UNW8 380 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 H0YL77 283 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 OR1E2P47887 323 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 PSEN2P49810 448 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 SPATA45Q537H7 98 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 PRR31Q5SQ13 230 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 ANKRD16Q6P6B7 361 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 UEVLDQ8IX04 471 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 PNKDQ8N490 385 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 ZNF418Q8TF45 676 aaPredicted RBP4.57□□□□□ -1.68
HERC4-205ENST00000412272 RSPRY1Q96DX4 576 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 NECAP2Q9NVZ3 263 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 A0A0G2JMM0 328 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 A0A1W2PPB8 328 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 KIR3DP1A8MWS1 328 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 FTCDNL1E5RQL4 147 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 IGHG4P01861 327 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 CELA3AP09093 270 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 FURINP09958 794 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 AKAIN1P0CW23 69 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 LAMP2P13473 410 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 SNRPBP14678 240 aaKnown RBP4.57□□□□□ -1.68
HERC4-205ENST00000412272 FBLP22087 321 aaKnown RBP4.57□□□□□ -1.68
HERC4-205ENST00000412272 ADIGQ0VDE8 80 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 FUT7Q11130 342 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 C9orf50Q5SZB4 431 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 SP5Q6BEB4 398 aaPredicted RBP4.57□□□□□ -1.68
HERC4-205ENST00000412272 DEFB125Q8N687 156 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 TCTEX1D1Q8N7M0 179 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 NECAP1Q8NC96 275 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 OR4D11Q8NGI4 311 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 OR5A2Q8NGI9 324 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 OR51A2Q8NGJ7 313 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 LGALS14Q8TCE9 139 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 IL22RA2Q969J5 263 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 OR10C1Q96KK4 312 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 SUSD3Q96L08 255 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 RNF126Q9BV68 326 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 PTPRDP23468 1912 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 PLXNB3Q9ULL4 1909 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 DNAJC25-GNG10A0A024R161 153 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 C13orf42A0A1B0GVH6 325 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 C19orf67A6NJJ6 358 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 LOC730098B7Z3J9 87 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 F5H5T6 163 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 UTS2O95399 124 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 CX3CR1P49238 355 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 YPEL3P61236 119 aaPredicted RBP4.56□□□□□ -1.68
HERC4-205ENST00000412272 SMAD3P84022 425 aaKnown RBP4.56□□□□□ -1.68
HERC4-205ENST00000412272 OR1Q1Q15612 314 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 C1orf189Q5VU69 101 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 ZNF776Q68DI1 518 aaPredicted RBP4.56□□□□□ -1.68
HERC4-205ENST00000412272 PWWP2BQ6NUJ5 590 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 CEACAM19Q7Z692 300 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 ZNF595Q8IYB9 648 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 C1orf174Q8IYL3 243 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 CLECL1Q8IZS7 167 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 TMEM217Q8N7C4 229 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 TMEM229BQ8NBD8 167 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 OR4C16Q8NGL9 310 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 OR2AE1Q8NHA4 323 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 PERPQ96FX8 193 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 SEC22AQ96IW7 307 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 GFI1Q99684 422 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 OR11A1Q9GZK7 315 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 SCN1AP35498 2009 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 TMEM213A2RRL7 107 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 SPRY1O43609 319 aaPredicted RBP4.56□□□□□ -1.68
HERC4-205ENST00000412272 UPK3AO75631 287 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 CLDN1O95832 211 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 SRFP11831 508 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 COX7A2P14406 83 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 KLK2P20151 261 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 TNFRSF1BP20333 461 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 SLC6A12P48065 614 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 RPS11P62280 158 aaKnown RBP eCLIP4.56□□□□□ -1.68
HERC4-205ENST00000412272 RPL23AP62750 156 aaKnown RBP4.56□□□□□ -1.68
HERC4-205ENST00000412272 PMPCAQ10713 525 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 TMEM176BQ3YBM2 270 aaPredicted RBP4.56□□□□□ -1.68
HERC4-205ENST00000412272 ACTL10Q5JWF8 245 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 CPTPQ5TA50 214 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 ZNF66Q6ZN08 573 aa4.56□□□□□ -1.68
HERC4-205ENST00000412272 RTN4RL1Q86UN2 441 aaPredicted RBP4.56□□□□□ -1.68
HERC4-205ENST00000412272 ZNF683Q8IZ20 524 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms