RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 DMAC2Q9NW81 257 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 FKBP14Q9NWM8 211 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 PAQR5Q9NXK6 330 aaPredicted RBP3.24□□□□□ -1.89
BRCA1-204ENST00000412061 FARSAQ9Y285 508 aaKnown RBP3.24□□□□□ -1.89
BRCA1-204ENST00000412061 ASTN1O14525 1302 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 DYSFO75923 2080 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 PLAC8L1A1L4L8 177 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 H3BP45 60 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 CCDC22O60826 627 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 SERPINB7O75635 380 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 GATBO75879 557 aaKnown RBP3.23□□□□□ -1.89
BRCA1-204ENST00000412061 P0C879 139 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 AKR1C4P17516 323 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 CRADDP78560 199 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 SARNPP82979 210 aaKnown RBP3.23□□□□□ -1.89
BRCA1-204ENST00000412061 SPA17Q15506 151 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 TMEM183BQ1AE95 376 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 RSPO1Q2MKA7 263 aaPredicted RBP3.23□□□□□ -1.89
BRCA1-204ENST00000412061 ZNF658BQ4V348 819 aaPredicted RBP3.23□□□□□ -1.89
BRCA1-204ENST00000412061 TCTEX1D4Q5JR98 221 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 TMEM255AQ5JRV8 349 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 Q6ZSR6 202 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 AKAP14Q86UN6 197 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 MDP1Q86V88 176 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 COMMD7Q86VX2 200 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 C11orf53Q8IXP5 236 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 TMEM183AQ8IXX5 376 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 CEND1Q8N111 149 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 STK40Q8N2I9 435 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 ZNF525Q8N782 197 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.23□□□□□ -1.89
BRCA1-204ENST00000412061 C16orf78Q8WTQ4 265 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 GHSRQ92847 366 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 CLDN23Q96B33 292 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 TMEM101Q96IK0 257 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 OR10C1Q96KK4 312 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 OR4K3Q96R72 315 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 DOK1Q99704 481 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 SLC25A31Q9H0C2 315 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 XPNPEP1Q9NQW7 623 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 ARL2BPQ9Y2Y0 163 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 MMACHCQ9Y4U1 282 aa3.23□□□□□ -1.89
BRCA1-204ENST00000412061 NPHP4O75161 1426 aaPredicted RBP3.23□□□□□ -1.89
BRCA1-204ENST00000412061 TRAV19A0A0A6YYK7 116 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 IGHV3-74A0A0B4J1X5 117 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 CENPVL3A0A0U1RRI6 287 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 CYSRT1A8MQ03 144 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 TMEM238C9JI98 176 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 NDUFC2-KCTD14E9PQ53 114 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 M0R1X1 148 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 DNASE2O00115 360 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-204ENST00000412061 UPK2O00526 184 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 PDCD6O75340 191 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 IGLV2-23P01705 113 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 GATA2P23769 480 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-204ENST00000412061 HTR1EP28566 365 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 CD79BP40259 229 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 HSPA13P48723 471 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 RAB25P57735 213 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 FMODQ06828 376 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 TAF1AQ15573 450 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-204ENST00000412061 C15orf32Q32M92 178 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 TSPO2Q5TGU0 170 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 HACD4Q5VWC8 232 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 CEMP1Q6PRD7 247 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-204ENST00000412061 LYPD2Q6UXB3 125 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 RASSF6Q6ZTQ3 369 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 RIMKLAQ8IXN7 391 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 UBALD2Q8IYN6 164 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 SLC26A10Q8NG04 563 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 GPR32P1Q8NGA4 272 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 ZNF420Q8TAQ5 688 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-204ENST00000412061 ENKURQ8TC29 256 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 CYGBQ8WWM9 190 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 SRSF12Q8WXF0 261 aaKnown RBP3.22□□□□□ -1.89
BRCA1-204ENST00000412061 AP3S1Q92572 193 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 CCL17Q92583 94 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 SNF8Q96H20 258 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 KCNS1Q96KK3 526 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 CEP19Q96LK0 163 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 HSD17B10Q99714 261 aaKnown RBP3.22□□□□□ -1.89
BRCA1-204ENST00000412061 TIPINQ9BVW5 301 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 V9GYQ6 96 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 NRCAMQ92823 1304 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 FLT4P35916 1363 aa3.22□□□□□ -1.89
BRCA1-204ENST00000412061 TET2Q6N021 2002 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-204ENST00000412061 TGIF2-C20orf24A0A0A6YYL0 155 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 IGHV6-1A0A0B4J1U7 121 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 FAM183AA6NL82 134 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 KPNA3O00505 521 aaPredicted RBP3.21□□□□□ -1.89
BRCA1-204ENST00000412061 MFNGO00587 321 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 FADS1O60427 444 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 GIG44P09565 113 aaPredicted RBP3.21□□□□□ -1.89
BRCA1-204ENST00000412061 CRISP2P16562 243 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 PRSS3P35030 304 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 ERFP50548 548 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 SLC18A1P54219 525 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 GFERP55789 205 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 ADIGQ0VDE8 80 aa3.21□□□□□ -1.89
BRCA1-204ENST00000412061 PNOCQ13519 176 aa3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms