RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 NRIP2Q9BQI9 281 aa13.73□□□□□ -0.21
HOXD3-202ENST00000410016 C1QTNF5Q9BXJ0 243 aa13.73□□□□□ -0.21
HOXD3-202ENST00000410016 SLC2A9Q9NRM0 540 aa13.73□□□□□ -0.21
HOXD3-202ENST00000410016 RCC2Q9P258 522 aaKnown RBP13.73□□□□□ -0.21
HOXD3-202ENST00000410016 PCSK5Q92824 1860 aa13.73□□□□□ -0.21
HOXD3-202ENST00000410016 NME2P22392 152 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 CYB561P49447 251 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 SSPNQ14714 243 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 DHRS7BQ6IAN0 325 aaPredicted RBP13.72□□□□□ -0.21
HOXD3-202ENST00000410016 SLC22A25Q6T423 547 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 LYZL2Q7Z4W2 148 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 GLYATL2Q8WU03 294 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 CPNE4Q96A23 557 aaPredicted RBP13.72□□□□□ -0.21
HOXD3-202ENST00000410016 MSI2Q96DH6 328 aaKnown RBP13.72□□□□□ -0.21
HOXD3-202ENST00000410016 C18orf12Q96KH6 178 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 SLC7A11Q9UPY5 501 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 LSM5Q9Y4Y9 91 aaKnown RBP13.72□□□□□ -0.21
HOXD3-202ENST00000410016 ZNF816-ZNF321PA0A0X1KG74 233 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 PDCD6O75340 191 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 FBXO24O75426 580 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 MED6O75586 246 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 RBM11P57052 281 aaKnown RBP13.72□□□□□ -0.21
HOXD3-202ENST00000410016 FXYD4P59646 89 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 S100A12P80511 92 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 PLCXD3Q63HM9 321 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 SLC23A3Q6PIS1 610 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 COLCA1Q6ZS62 124 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 ERGIC1Q969X5 290 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 PRDM6Q9NQX0 595 aa13.72□□□□□ -0.21
HOXD3-202ENST00000410016 H7C1Q1 480 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 F10P00742 488 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 IGHV3-9P01782 118 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 SERPINA7P05543 415 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 CD5P06127 495 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 GDF1P27539 372 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 UCP3P55916 312 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 SMCO1Q147U7 214 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 HFEQ30201 348 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 ABCA11PQ4W5N1 156 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 PHLDA2Q53GA4 152 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 CBLN2Q8IUK8 224 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 UBAC2Q8NBM4 344 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 LYPD6BQ8NI32 183 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 CT55Q8WUE5 264 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 MOB3AQ96BX8 217 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 SUCNR1Q9BXA5 334 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 PRDM14Q9GZV8 571 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 IFT22Q9H7X7 185 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 PLEKHA2Q9HB19 425 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 P4HTMQ9NXG6 502 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 CELSR3Q9NYQ7 3312 aa13.71□□□□□ -0.21
HOXD3-202ENST00000410016 LAMTOR5O43504 91 aa13.71□□□□□ -0.22
HOXD3-202ENST00000410016 XRCC2O43543 280 aa13.71□□□□□ -0.22
HOXD3-202ENST00000410016 GLI4P10075 376 aa13.71□□□□□ -0.22
HOXD3-202ENST00000410016 NPBWR1P48145 328 aa13.71□□□□□ -0.22
HOXD3-202ENST00000410016 NPBWR2P48146 333 aa13.71□□□□□ -0.22
HOXD3-202ENST00000410016 NRN1LQ496H8 165 aa13.71□□□□□ -0.22
HOXD3-202ENST00000410016 TMEM211Q6ICI0 200 aa13.71□□□□□ -0.22
HOXD3-202ENST00000410016 SPINK14Q6IE38 97 aa13.71□□□□□ -0.22
HOXD3-202ENST00000410016 LIAT1Q6ZQX7 453 aa13.71□□□□□ -0.22
HOXD3-202ENST00000410016 Q8NFD4 153 aa13.71□□□□□ -0.22
HOXD3-202ENST00000410016 TMEM45BQ96B21 275 aa13.71□□□□□ -0.22
HOXD3-202ENST00000410016 BSCL2Q96G97 398 aaPredicted RBP13.71□□□□□ -0.22
HOXD3-202ENST00000410016 ARV1Q9H2C2 271 aa13.71□□□□□ -0.22
HOXD3-202ENST00000410016 ZNF286AQ9HBT8 521 aa13.71□□□□□ -0.22
HOXD3-202ENST00000410016 PARP11Q9NR21 331 aa13.71□□□□□ -0.22
HOXD3-202ENST00000410016 RNASEK-C17orf49H0YIS7 233 aa13.7□□□□□ -0.22
HOXD3-202ENST00000410016 FUT3P21217 361 aa13.7□□□□□ -0.22
HOXD3-202ENST00000410016 MALLQ13021 153 aa13.7□□□□□ -0.22
HOXD3-202ENST00000410016 C6orf15Q6UXA7 325 aaPredicted RBP13.7□□□□□ -0.22
HOXD3-202ENST00000410016 SPAG16Q8N0X2 631 aa13.7□□□□□ -0.22
HOXD3-202ENST00000410016 ZNF611Q8N823 705 aa13.7□□□□□ -0.22
HOXD3-202ENST00000410016 OR11L1Q8NGX0 322 aa13.7□□□□□ -0.22
HOXD3-202ENST00000410016 TECTBQ96PL2 329 aa13.7□□□□□ -0.22
HOXD3-202ENST00000410016 SMIM3Q9BZL3 60 aa13.7□□□□□ -0.22
HOXD3-202ENST00000410016 NDRG3Q9UGV2 375 aa13.7□□□□□ -0.22
HOXD3-202ENST00000410016 FAM157AC9JC47 383 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 C9JQL5 133 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 E5RGE8 158 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 SNAPINO95295 136 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 SCGB1D2O95969 90 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 ACP1P24666 158 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 PMELP40967 661 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 ID4P47928 161 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 HAGHLQ6PII5 290 aaPredicted RBP13.69□□□□□ -0.22
HOXD3-202ENST00000410016 CLEC9AQ6UXN8 241 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 SMOC1Q9H4F8 434 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 NSG2Q9Y328 171 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 STARD10Q9Y365 291 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 IGKV3D-15A0A087WSY6 115 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 DIRAS3O95661 229 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 FLI1Q01543 452 aaPredicted RBP13.69□□□□□ -0.22
HOXD3-202ENST00000410016 SLC25A26Q70HW3 274 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 OR52M1Q8NGK5 317 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 OR5L1Q8NGL2 311 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 RSRP1Q9BUV0 290 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 ZDHHC8Q9ULC8 765 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 LHX6Q9UPM6 363 aa13.69□□□□□ -0.22
HOXD3-202ENST00000410016 LOXL2Q9Y4K0 774 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms