RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 MRGPRFQ96AM1 343 aa6.44□□□□□ -1.38
CXCR4-202ENST00000409817 WBP1Q96G27 269 aa6.44□□□□□ -1.38
CXCR4-202ENST00000409817 ZNF75AQ96N20 296 aa6.44□□□□□ -1.38
CXCR4-202ENST00000409817 CMSS1Q9BQ75 279 aaKnown RBP6.44□□□□□ -1.38
CXCR4-202ENST00000409817 LRFN3Q9BTN0 628 aa6.44□□□□□ -1.38
CXCR4-202ENST00000409817 ST6GALNAC5Q9BVH7 336 aa6.44□□□□□ -1.38
CXCR4-202ENST00000409817 OBP2BQ9NPH6 170 aa6.44□□□□□ -1.38
CXCR4-202ENST00000409817 ST3GAL6Q9Y274 331 aa6.44□□□□□ -1.38
CXCR4-202ENST00000409817 FRYLO94915 3013 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 IGKV1-12A0A0C4DH73 117 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 RFPL4AA6NLU0 287 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 RFPL4AL1F8VTS6 287 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 L7N2F9 121 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 IGKV1D-12P01611 117 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 CRHP06850 196 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 ZNF35P13682 527 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 PPP3CBP16298 524 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 COX5AP20674 150 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 FUT3P21217 361 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 PTGER4P35408 488 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 ARPC4P59998 168 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 SEC61A1P61619 476 aaKnown RBP6.43□□□□□ -1.38
CXCR4-202ENST00000409817 CYCSP99999 105 aaKnown RBP6.43□□□□□ -1.38
CXCR4-202ENST00000409817 PPP1R1AQ13522 171 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 TAF9Q16594 264 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 MPV17LQ2QL34 196 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 HIKESHIQ53FT3 197 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 DMRTC1Q5HYR2 192 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 SIGIRRQ6IA17 410 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 TMEM211Q6ICI0 200 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 TEX261Q6UWH6 196 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 FBXW12Q6X9E4 464 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 MDP1Q86V88 176 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 ZNF573Q86YE8 665 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 C1orf174Q8IYL3 243 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 FBXL14Q8N1E6 418 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 C17orf78Q8N4C9 275 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 MARCH1Q8TCQ1 289 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 TRIB1Q96RU8 372 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 JMJD8Q96S16 334 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 SPACA1Q9HBV2 294 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 DECR2Q9NUI1 292 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 ZNF701Q9NV72 531 aaPredicted RBP6.43□□□□□ -1.38
CXCR4-202ENST00000409817 EHFQ9NZC4 300 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 ANXA10Q9UJ72 324 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 OSGIN2Q9Y236 505 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 STARD10Q9Y365 291 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 U3KQ87 197 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 CACNA1GO43497 2377 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 TUBAL3A6NHL2 446 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 DBX1A6NMT0 343 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 MCRIP1C9JLW8 97 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 TOXO94900 526 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 SCGB1D2O95969 90 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 GLAP06280 429 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 SFTPBP07988 381 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 RPA2P15927 270 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 SELEP16581 610 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 ZNF14P17017 642 aaPredicted RBP6.43□□□□□ -1.38
CXCR4-202ENST00000409817 IGHV1-2P23083 117 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 FGF12P61328 243 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 GNG3P63215 75 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 GABRA6Q16445 453 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 PLEKHN1Q494U1 663 aaPredicted RBP6.43□□□□□ -1.38
CXCR4-202ENST00000409817 ACSF3Q4G176 576 aaPredicted RBP6.43□□□□□ -1.38
CXCR4-202ENST00000409817 LY6G6FQ5SQ64 297 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 C1QTNF12Q5T7M4 302 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 TMEM65Q6PI78 240 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 Q6ZS49 121 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 Q6ZS92 163 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 SLC25A26Q70HW3 274 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 MED12LQ86YW9 2145 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 CLRN3Q8NCR9 226 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 OR10AD1Q8NGE0 317 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 OR8H1Q8NGG4 311 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 COQ8AQ8NI60 647 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 HPSE2Q8WWQ2 592 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 OR5P3Q8WZ94 311 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 GTF3AQ92664 365 aaKnown RBP6.43□□□□□ -1.38
CXCR4-202ENST00000409817 PKIBQ9C010 78 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 HEXA-AS1Q9H8Q6 139 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 CDH20Q9HBT6 801 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 ZNF286AQ9HBT8 521 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 C12orf4Q9NQ89 552 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 NECAP2Q9NVZ3 263 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 COMMD9Q9P000 198 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 SLC23A1Q9UHI7 598 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 GPR160Q9UJ42 338 aa6.43□□□□□ -1.38
CXCR4-202ENST00000409817 C14orf166Q9Y224 244 aaKnown RBP6.43□□□□□ -1.38
CXCR4-202ENST00000409817 CNOT1A5YKK6 2376 aaKnown RBP6.42□□□□□ -1.38
CXCR4-202ENST00000409817 WDFY4Q6ZS81 3184 aa6.42□□□□□ -1.38
CXCR4-202ENST00000409817 TRAPPC2LH3BP13 241 aa6.42□□□□□ -1.38
CXCR4-202ENST00000409817 GEMIN2O14893 280 aaKnown RBP6.42□□□□□ -1.38
CXCR4-202ENST00000409817 SFT2D2O95562 160 aa6.42□□□□□ -1.38
CXCR4-202ENST00000409817 PLATP00750 562 aa6.42□□□□□ -1.38
CXCR4-202ENST00000409817 NGFP01138 241 aa6.42□□□□□ -1.38
CXCR4-202ENST00000409817 CRYABP02511 175 aaKnown RBP6.42□□□□□ -1.38
CXCR4-202ENST00000409817 FCGR3AP08637 254 aa6.42□□□□□ -1.38
CXCR4-202ENST00000409817 SLC25A4P12235 298 aa6.42□□□□□ -1.38
CXCR4-202ENST00000409817 CCL2P13500 99 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms