RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 KLHL12Q53G59 568 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 TEX30Q5JUR7 227 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 ZNF684Q5T5D7 378 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 TSPO2Q5TGU0 170 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 CARD17Q5XLA6 110 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 XAF1Q6GPH4 301 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 OR2A2Q6IF42 318 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 DNM1P34Q6PK57 102 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 TFAP2EQ6VUC0 442 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 SSX6Q7RTT6 188 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 AAED1Q7RTV5 226 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 P4HA3Q7Z4N8 544 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 CDC20BQ86Y33 519 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 SLC35F2Q8IXU6 374 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 ABHD12Q8N2K0 398 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 SYT14Q8NB59 555 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 PROKR2Q8NFJ6 384 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 OR4F15Q8NGB8 312 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 OR51L1Q8NGJ5 315 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 OR51G2Q8NGK0 314 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 OR6K3Q8NGY3 331 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 MYDGFQ969H8 173 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 NABP1Q96AH0 204 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 APH1AQ96BI3 265 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 ZMYND19Q96E35 227 aaPredicted RBP3.4□□□□□ -1.87
CLK1-203ENST00000409769 TMEM80Q96HE8 168 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 ZFP3Q96NJ6 502 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 NEDD4LQ96PU5 975 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 ALKBH3Q96Q83 286 aaPredicted RBP3.4□□□□□ -1.87
CLK1-203ENST00000409769 RBP7Q96R05 134 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 CNN2Q99439 309 aaKnown RBP3.4□□□□□ -1.87
CLK1-203ENST00000409769 SOSTQ9BQB4 213 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 TTYH2Q9BSA4 534 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 PAPOLGQ9BWT3 736 aaKnown RBP3.4□□□□□ -1.87
CLK1-203ENST00000409769 MRPS26Q9BYN8 205 aaKnown RBP3.4□□□□□ -1.87
CLK1-203ENST00000409769 C5orf66Q9H5L9 145 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 WDR76Q9H967 626 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 ACOT13Q9NPJ3 140 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 POLE4Q9NR33 117 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 INPP5EQ9NRR6 644 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 TMEM38BQ9NVV0 291 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 TAS2R16Q9NYV7 291 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 CLEC4AQ9UMR7 237 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 COPS3Q9UNS2 423 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 KLHDC2Q9Y2U9 406 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 COMMD3-BMI1R4GMX3 469 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 SPTBN1Q01082 2364 aaKnown RBP3.4□□□□□ -1.87
CLK1-203ENST00000409769 CADP27708 2225 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 ZFYVE26Q68DK2 2539 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 A0A087WXM4 84 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 A0A1W2PQL4 384 aaPredicted RBP3.39□□□□□ -1.87
CLK1-203ENST00000409769 TMEM129A0AVI4 362 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 TVP23AA6NH52 213 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 C12orf71A8MTZ7 269 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 A8MXK9 166 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 ZNF99A8MXY4 864 aaPredicted RBP3.39□□□□□ -1.87
CLK1-203ENST00000409769 ZNF593O00488 134 aaPredicted RBP3.39□□□□□ -1.87
CLK1-203ENST00000409769 TNFSF12O43508 249 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 MPZL1O95297 269 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 FADS2O95864 444 aaKnown RBP3.39□□□□□ -1.87
CLK1-203ENST00000409769 IGHV3-9P01782 118 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 MRPL3P09001 348 aaKnown RBP3.39□□□□□ -1.87
CLK1-203ENST00000409769 NPR2P20594 1047 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 COX5AP20674 150 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 MSR1P21757 451 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 IGHV1-2P23083 117 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 NAA10P41227 235 aaPredicted RBP3.39□□□□□ -1.87
CLK1-203ENST00000409769 CA7P43166 264 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 MAP2K4P45985 399 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 ETV1P50549 477 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 HCCSP53701 268 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 KRTAP12-2P59991 146 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 LSM6P62312 80 aaKnown RBP3.39□□□□□ -1.87
CLK1-203ENST00000409769 ACTC1P68032 377 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 ACTA1P68133 377 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 HIST1H3AP68431 136 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 ENDOGQ14249 297 aaKnown RBP3.39□□□□□ -1.87
CLK1-203ENST00000409769 MEP1BQ16820 701 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 CEACAM16Q2WEN9 425 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 SYT6Q5T7P8 510 aaPredicted RBP3.39□□□□□ -1.87
CLK1-203ENST00000409769 HIST2H3PS2Q5TEC6 136 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 OR2G6Q5TZ20 316 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 FAM27BQ5VT28 67 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 UBE2UQ5VVX9 321 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 OTPQ5XKR4 325 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 FBXW9Q5XUX1 488 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 HIST2H3AQ71DI3 136 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 EGFL6Q8IUX8 553 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 ERI1Q8IV48 349 aaKnown RBP3.39□□□□□ -1.87
CLK1-203ENST00000409769 GCNT2Q8N0V5 402 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 GABRG1Q8N1C3 465 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 GPR137CQ8N3F9 429 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 STX19Q8N4C7 294 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 ACBD7Q8N6N7 88 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 RELL2Q8NC24 303 aaPredicted RBP3.39□□□□□ -1.87
CLK1-203ENST00000409769 OR6K6Q8NGW6 343 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 OR6N1Q8NGY5 312 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 OR6N2Q8NGY6 317 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 OR2T27Q8NH04 317 aa3.39□□□□□ -1.87
CLK1-203ENST00000409769 OR52N1Q8NH53 320 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms