RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 ZNF146Q15072 292 aa16.41■□□□□ 0.22
PDLIM2-207ENST00000409417 SPIN3Q5JUX0 258 aa16.41■□□□□ 0.22
PDLIM2-207ENST00000409417 C8orf46Q8TAG6 207 aa16.41■□□□□ 0.22
PDLIM2-207ENST00000409417 TNFAIP8L1Q8WVP5 186 aa16.41■□□□□ 0.22
PDLIM2-207ENST00000409417 CNTD2Q9H8S5 307 aa16.41■□□□□ 0.22
PDLIM2-207ENST00000409417 LRRC42Q9Y546 428 aa16.41■□□□□ 0.22
PDLIM2-207ENST00000409417 GABRPO00591 440 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 SC5DO75845 299 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 FSHBP01225 129 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 CHRM2P08172 466 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 PRKACAP17612 351 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 PTGFRP43088 359 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 CAPZA1P52907 286 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 SCGB2A2Q13296 93 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 INSL4Q14641 139 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 ASCL4Q6XD76 172 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 PRIMA1Q86XR5 153 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 PHC2Q8IXK0 858 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 SVOPQ8N4V2 548 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 H1FXQ92522 213 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 UPRTQ96BW1 309 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 FAM234AQ9H0X4 552 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 IL36RNQ9UBH0 155 aa16.4■□□□□ 0.22
PDLIM2-207ENST00000409417 MAGEA13PA6NCF6 341 aa16.39■□□□□ 0.21
PDLIM2-207ENST00000409417 K7N7A8 449 aa16.39■□□□□ 0.21
PDLIM2-207ENST00000409417 ZNF737O75373 536 aa16.39■□□□□ 0.21
PDLIM2-207ENST00000409417 HAND1O96004 215 aa16.39■□□□□ 0.21
PDLIM2-207ENST00000409417 PSMA1P25786 263 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-207ENST00000409417 BMXP51813 675 aa16.39■□□□□ 0.21
PDLIM2-207ENST00000409417 FGF12P61328 243 aa16.39■□□□□ 0.21
PDLIM2-207ENST00000409417 COL10A1Q03692 680 aa16.39■□□□□ 0.21
PDLIM2-207ENST00000409417 TRAM1Q15629 374 aa16.39■□□□□ 0.21
PDLIM2-207ENST00000409417 ARMCX4Q5H9R4 360 aa16.39■□□□□ 0.21
PDLIM2-207ENST00000409417 ELP2Q6IA86 826 aa16.39■□□□□ 0.21
PDLIM2-207ENST00000409417 CEACAM19Q7Z692 300 aa16.39■□□□□ 0.21
PDLIM2-207ENST00000409417 SPARTQ8N0X7 666 aa16.39■□□□□ 0.21
PDLIM2-207ENST00000409417 TMEM203Q969S6 136 aa16.39■□□□□ 0.21
PDLIM2-207ENST00000409417 GLS2Q9UI32 602 aa16.39■□□□□ 0.21
PDLIM2-207ENST00000409417 TRBV23-1A0A0A0MS06 115 aa16.38■□□□□ 0.21
PDLIM2-207ENST00000409417 TK1P04183 234 aa16.38■□□□□ 0.21
PDLIM2-207ENST00000409417 CALCBP10092 127 aa16.38■□□□□ 0.21
PDLIM2-207ENST00000409417 DUSP1P28562 367 aa16.38■□□□□ 0.21
PDLIM2-207ENST00000409417 OR3A4PP47883 348 aa16.38■□□□□ 0.21
PDLIM2-207ENST00000409417 CDH26Q8IXH8 852 aa16.38■□□□□ 0.21
PDLIM2-207ENST00000409417 ASCC1Q8N9N2 400 aaKnown RBP16.38■□□□□ 0.21
PDLIM2-207ENST00000409417 FAM192AQ9GZU8 254 aa16.38■□□□□ 0.21
PDLIM2-207ENST00000409417 ELL3Q9HB65 397 aaPredicted RBP16.38■□□□□ 0.21
PDLIM2-207ENST00000409417 GSTK1Q9Y2Q3 226 aa16.38■□□□□ 0.21
PDLIM2-207ENST00000409417 MAS1P04201 325 aa16.37■□□□□ 0.21
PDLIM2-207ENST00000409417 MTNR1BP49286 362 aa16.37■□□□□ 0.21
PDLIM2-207ENST00000409417 ARF6P62330 175 aa16.37■□□□□ 0.21
PDLIM2-207ENST00000409417 RPS25P62851 125 aaKnown RBP16.37■□□□□ 0.21
PDLIM2-207ENST00000409417 RSU1Q15404 277 aa16.37■□□□□ 0.21
PDLIM2-207ENST00000409417 KLF17Q5JT82 389 aaPredicted RBP16.37■□□□□ 0.21
PDLIM2-207ENST00000409417 FAM27D1Q5T7N8 215 aa16.37■□□□□ 0.21
PDLIM2-207ENST00000409417 METTL11BQ5VVY1 283 aa16.37■□□□□ 0.21
PDLIM2-207ENST00000409417 NKAIN3Q8N8D7 197 aa16.37■□□□□ 0.21
PDLIM2-207ENST00000409417 Q8NFD4 153 aa16.37■□□□□ 0.21
PDLIM2-207ENST00000409417 WDFY2Q96P53 400 aa16.37■□□□□ 0.21
PDLIM2-207ENST00000409417 NKX3-1Q99801 234 aaPredicted RBP16.37■□□□□ 0.21
PDLIM2-207ENST00000409417 KPTNQ9Y664 436 aa16.37■□□□□ 0.21
PDLIM2-207ENST00000409417 MEGF11A6BM72 1044 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 SH2D1BO14796 132 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 TOX4O94842 621 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 UCHL1P09936 223 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 MMP9P14780 707 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 EPHA1P21709 976 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 GP2P55259 537 aaKnown RBP16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 SNU13P55769 128 aaKnown RBP16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 KCTD21Q4G0X4 260 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 UBE2UQ5VVX9 321 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 ZNF773Q6PK81 442 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 C17orf107Q6ZR85 190 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 JAGN1Q8N5M9 183 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 KIR3DL3Q8N743 410 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 OR5D13Q8NGL4 314 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 PHYHIPQ92561 330 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 SNX22Q96L94 193 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 SIRPDQ9H106 197 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 TCF7L1Q9HCS4 588 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 IL36GQ9NZH8 169 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 NUP50Q9UKX7 468 aa16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 SF3B6Q9Y3B4 125 aaKnown RBP16.36■□□□□ 0.21
PDLIM2-207ENST00000409417 TMEM82A0PJX8 343 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 CDRT1O95170 752 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 SRMP19623 302 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 GABRA5P31644 462 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 RPL31P62899 125 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 KRTAP21-3Q3LHN1 58 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 HSD17B12Q53GQ0 312 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 TMEM91Q6ZNR0 172 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 CMTM4Q8IZR5 234 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 OR8H2Q8N162 312 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 TBC1D15Q8TC07 691 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 FCGR1BQ92637 280 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 S100A13Q99584 98 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 PCGF1Q9BSM1 259 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 METTL9Q9H1A3 318 aa16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 PPIL3Q9H2H8 161 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-207ENST00000409417 EXOSC4Q9NPD3 245 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms