RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 ANKRD10Q9NXR5 420 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 PEMTQ9UBM1 199 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 SH3BGRL2Q9UJC5 107 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 MMP24Q9Y5R2 645 aa4.76□□□□□ -1.65
CLK1-202ENST00000409403 NUP214P35658 2090 aaPredicted RBP4.76□□□□□ -1.65
CLK1-202ENST00000409403 CCDC88CQ9P219 2028 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 CEP192Q8TEP8 1941 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 FN1P02751 2386 aaKnown RBP4.75□□□□□ -1.65
CLK1-202ENST00000409403 CHD5Q8TDI0 1954 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 TRBV24-1A0A075B6N3 115 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 LOC100509620A0A075B734 347 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 TRBV5-7A0A0A0MS05 114 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 SMIM35A0A1B0GVV1 85 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 TMEM212A6NML5 194 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 FTCDNL1E5RQL4 147 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 SLC17A2O00624 439 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 PIN1P1O15428 100 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 PLRG1O43660 514 aaKnown RBP4.75□□□□□ -1.65
CLK1-202ENST00000409403 STK17BO94768 372 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 DDAH2O95865 285 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 TRGC2P03986 189 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 IFNA6P05013 189 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 CLEC3BP05452 202 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 SLC35G4P0C7Q5 338 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 IMPA1P29218 277 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 GABRA4P48169 554 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 CARD18P57730 90 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 PROK1P58294 105 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 SELENOTP62341 195 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 PAX5Q02548 391 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 TGM3Q08188 693 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 ZNF616Q08AN1 781 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 RASGEF1BQ0VAM2 473 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 PRDX4Q13162 271 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 TMEM128Q5BJH2 165 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 PDZD11Q5EBL8 140 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 ALG10BQ5I7T1 473 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 SDHAF4Q5VUM1 108 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 FBXW12Q6X9E4 464 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 ZNF788Q6ZQV5 615 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 KCTD9Q7L273 389 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 GRINAQ7Z429 371 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 CACUL1Q86Y37 369 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 PRSS58Q8IYP2 241 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 OR10G4Q8NGN3 311 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 CASTOR1Q8WTX7 329 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 OIT3Q8WWZ8 545 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 PTX4Q96A99 478 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 MS4A6EQ96DS6 147 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 SEH1LQ96EE3 360 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 BTF3L4Q96K17 158 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 OR11A1Q9GZK7 315 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 WWTR1Q9GZV5 400 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 LINC00597Q9H2U6 94 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 MED20Q9H944 212 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 LPAR2Q9HBW0 351 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 PDE7BQ9NP56 450 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 PRSS16Q9NQE7 514 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 SIRT3Q9NTG7 399 aaPredicted RBP4.75□□□□□ -1.65
CLK1-202ENST00000409403 ZCCHC3Q9NUD5 404 aaKnown RBP4.75□□□□□ -1.65
CLK1-202ENST00000409403 OR5AC2Q9NZP5 309 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 ICAM5Q9UMF0 924 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 KCNK6Q9Y257 313 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 CLDN16Q9Y5I7 305 aa4.75□□□□□ -1.65
CLK1-202ENST00000409403 PUS1Q9Y606 427 aaKnown RBP eCLIP4.75□□□□□ -1.65
CLK1-202ENST00000409403 KIAA1549LQ6ZVL6 1849 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 ARHGEF17Q96PE2 2063 aaPredicted RBP4.74□□□□□ -1.65
CLK1-202ENST00000409403 A6NIZ1 184 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 DUXAA6NLW8 204 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 PRSS47A8MTI9 375 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 H3BQ15 152 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 CLDN34H7C241 214 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 PTGESO14684 152 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 TCF21O43680 179 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 SLCO2B1O94956 709 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 AHSA1O95433 338 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 AMBPP02760 352 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 PRH1P02810 166 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 HSPB1P04792 205 aaKnown RBP4.74□□□□□ -1.65
CLK1-202ENST00000409403 ZNF735P0CB33 412 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 ATP1B2P14415 290 aaPredicted RBP4.74□□□□□ -1.65
CLK1-202ENST00000409403 TEAD1P28347 426 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 BMI1P35226 326 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 CSNK1DP48730 415 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 NPY4RP50391 375 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 RND2P52198 227 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 RPS20P60866 119 aaKnown RBP4.74□□□□□ -1.65
CLK1-202ENST00000409403 CDK3Q00526 305 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 EBPQ15125 230 aaKnown RBP4.74□□□□□ -1.65
CLK1-202ENST00000409403 ACOT6Q3I5F7 207 aaPredicted RBP4.74□□□□□ -1.65
CLK1-202ENST00000409403 TMEM176BQ3YBM2 270 aaPredicted RBP4.74□□□□□ -1.65
CLK1-202ENST00000409403 C10orf120Q5SQS8 335 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 RPL7L1Q6DKI1 246 aaKnown RBP4.74□□□□□ -1.65
CLK1-202ENST00000409403 SZRD1Q7Z422 152 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 GALNTL5Q7Z4T8 443 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 C17orf64Q86WR6 236 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 GKN2Q86XP6 184 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 TGIF2LYQ8IUE0 185 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 ZNF101Q8IZC7 436 aa4.74□□□□□ -1.65
CLK1-202ENST00000409403 OR2L13Q8N349 312 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms