RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 GRHL3Q8TE85 626 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 GNPNAT1Q96EK6 184 aaPredicted RBP9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 ABHD14BQ96IU4 210 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 HIST1H2AAQ96QV6 131 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 G6PC3Q9BUM1 346 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 LRRC61Q9BV99 259 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 PLK3Q9H4B4 646 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 CBLN4Q9NTU7 201 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 FKBP11Q9NYL4 201 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 GSKIPQ9P0R6 139 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 IGKV1-8A0A0C4DH67 115 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 NKX6-3A6NJ46 265 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 DHRS7CA6NNS2 312 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 GEMIN2O14893 280 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 KALRNO60229 2985 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 CIDEAO60543 219 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 CTSDP07339 412 aaPredicted RBP9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 UMODP07911 640 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 ZNF43P17038 809 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 SERPINA2P20848 420 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 GRPRP30550 384 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 OR3A2P47893 321 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 DNASE1L1P49184 302 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 UNC119Q13432 240 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 C1orf61Q13536 156 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 DEFB133Q30KQ1 61 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 NCR3LG1Q68D85 454 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 LEMD1Q68G75 181 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 RTL6Q6ICC9 239 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 TMPRSS7Q7RTY8 843 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 OR4D6Q8NGJ1 314 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 OR14L1PQ8NHC6 308 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 CLDND2Q8NHS1 167 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 FAM213BQ8TBF2 198 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 NT5CQ8TCD5 201 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 AGMATQ9BSE5 352 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 CABLES2Q9BTV7 478 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 ULBP3Q9BZM4 244 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 SDF2L1Q9HCN8 221 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 SEMA5BQ9P283 1151 aa9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 ZNF346Q9UL40 294 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 C14orf166Q9Y224 244 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 POLR3KQ9Y2Y1 108 aaPredicted RBP9.32□□□□□ -0.92
NIF3L1-204ENST00000409357 URB1O60287 2271 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 HEATR5BQ9P2D3 2071 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 A0A0G2JN53 185 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 LOC102723971A0A1B0GUV8 181 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 XKRY2A2RUG3 117 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 A8MVM7 634 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 B4E171 279 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 XKRYO14609 159 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 MMP23AO75900 390 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 OR4A8P0C604 315 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 PGA3P0DJD8 388 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 PNMTP11086 282 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 PTGER1P34995 402 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 CDK3Q00526 305 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 COL10A1Q03692 680 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 DPY19L4Q7Z388 723 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 GRINAQ7Z429 371 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 GBGT1Q8N5D6 347 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 CHST4Q8NCG5 386 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 OR1N1Q8NGS0 311 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 OR13G1Q8NGZ3 307 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 TSACCQ96A04 125 aaPredicted RBP9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 LMF2Q9BU23 707 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 ZMAT3Q9HA38 289 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 CISD1Q9NZ45 108 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 CGGBP1Q9UFW8 167 aaPredicted RBP9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 APOBEC3BQ9UH17 382 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 NAGKQ9UJ70 344 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 R4GMQ9 66 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 URGCP-MRPS24S4R325 110 aa9.31□□□□□ -0.92
NIF3L1-204ENST00000409357 TRAV39A0A0B4J263 110 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 CRYM-AS1A6NIL9 109 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 SIAH2O43255 324 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 PNPP00491 289 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 HPRT1P00492 218 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 KNG1P01042 644 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 OPN1LWP04000 364 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 ASAH2BP0C7U1 165 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 SMIM10L1P0DMW3 83 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 VSIG8P0DPA2 414 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 IRF2P14316 349 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 CPMP14384 443 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 HIST1H1DP16402 221 aaKnown RBP9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 TLX1P31314 330 aaPredicted RBP9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 FHITP49789 147 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 HIST1H3AP68431 136 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 ZNF74Q16587 644 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 MEP1BQ16820 701 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 C4orf48Q5BLP8 95 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 FAM90A2PQ658T7 463 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 POMZP3Q6PJE2 187 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 SMIM15Q7Z3B0 74 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 FOXRED2Q8IWF2 684 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 SFTPA2Q8IWL1 248 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 CYB561D1Q8N8Q1 229 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 LMX1AQ8TE12 382 aa9.3□□□□□ -0.92
NIF3L1-204ENST00000409357 ZCCHC14Q8WYQ9 949 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms