RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 MBD3L2Q8NHZ7 208 aaPredicted RBP21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 TMEM230Q96A57 120 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 STARD4Q96DR4 205 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 ZNF286AQ9HBT8 521 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 C12orf4Q9NQ89 552 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 C14orf166Q9Y224 244 aaKnown RBP21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 TNFSF13O75888 250 aa21.12■□□□□ 0.97
DNMT3A-206ENST00000406659 SFT2D2O95562 160 aa21.12■□□□□ 0.97
DNMT3A-206ENST00000406659 GLRA1P23415 457 aa21.12■□□□□ 0.97
DNMT3A-206ENST00000406659 UCP2P55851 309 aa21.12■□□□□ 0.97
DNMT3A-206ENST00000406659 OPCMLQ14982 345 aa21.12■□□□□ 0.97
DNMT3A-206ENST00000406659 PLEKHN1Q494U1 663 aaPredicted RBP21.12■□□□□ 0.97
DNMT3A-206ENST00000406659 CXorf67Q86X51 503 aaPredicted RBP21.12■□□□□ 0.97
DNMT3A-206ENST00000406659 OPN3Q9H1Y3 402 aaPredicted RBP21.12■□□□□ 0.97
DNMT3A-206ENST00000406659 FAM25EA8MYX2 175 aa21.11■□□□□ 0.97
DNMT3A-206ENST00000406659 F8VVB4 439 aa21.11■□□□□ 0.97
DNMT3A-206ENST00000406659 F8VWA3 439 aa21.11■□□□□ 0.97
DNMT3A-206ENST00000406659 M0R233 179 aa21.11■□□□□ 0.97
DNMT3A-206ENST00000406659 WDR1O75083 606 aa21.11■□□□□ 0.97
DNMT3A-206ENST00000406659 S100A1P23297 94 aa21.11■□□□□ 0.97
DNMT3A-206ENST00000406659 FGL1Q08830 312 aa21.11■□□□□ 0.97
DNMT3A-206ENST00000406659 DAZAP2Q15038 168 aaPredicted RBP21.11■□□□□ 0.97
DNMT3A-206ENST00000406659 OR1J1Q8NGS3 322 aa21.11■□□□□ 0.97
DNMT3A-206ENST00000406659 SLC25A40Q8TBP6 338 aa21.11■□□□□ 0.97
DNMT3A-206ENST00000406659 MICU1Q9BPX6 476 aa21.11■□□□□ 0.97
DNMT3A-206ENST00000406659 RTL8AQ9BWD3 113 aa21.11■□□□□ 0.97
DNMT3A-206ENST00000406659 PRRC2CQ9Y520 2896 aaKnown RBP21.11■□□□□ 0.97
DNMT3A-206ENST00000406659 RFPL4AA6NLU0 287 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 RFPL4AL1F8VTS6 287 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 ARPC5O15511 151 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 TPD52L2O43399 206 aaKnown RBP21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 CD8AP01732 235 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 RAC2P15153 192 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 SLC22A25Q6T423 547 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 ZNF680Q8NEM1 530 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 EXTL1Q92935 676 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 SEC22AQ96IW7 307 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 PKIBQ9C010 78 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 PLK3Q9H4B4 646 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 CHMP1AQ9HD42 196 aaPredicted RBP21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 COMMD9Q9P000 198 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 LUZP4Q9P127 313 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 LOC400499M0QZD8 3231 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 CGAP01215 116 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 PRKACAP17612 351 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 ERVS71-1P61550 626 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 SLC9A3R2Q15599 337 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 MPV17LQ2QL34 196 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 CLEC18BQ6UXF7 455 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 SEM1Q6ZVN7 128 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 C17orf78Q8N4C9 275 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 HS3ST6Q96QI5 342 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 OR51I2Q9H344 312 aa21.1■□□□□ 0.97
DNMT3A-206ENST00000406659 MPC2O95563 127 aa21.09■□□□□ 0.97
DNMT3A-206ENST00000406659 IGKV3-15P01624 115 aa21.09■□□□□ 0.97
DNMT3A-206ENST00000406659 CRHP06850 196 aa21.09■□□□□ 0.97
DNMT3A-206ENST00000406659 SELEP16581 610 aa21.09■□□□□ 0.97
DNMT3A-206ENST00000406659 IL24Q13007 206 aa21.09■□□□□ 0.97
DNMT3A-206ENST00000406659 P2RY6Q15077 328 aa21.09■□□□□ 0.97
DNMT3A-206ENST00000406659 ZNF71Q9NQZ8 489 aaPredicted RBP21.09■□□□□ 0.97
DNMT3A-206ENST00000406659 PTPRZ1P23471 2315 aaPredicted RBP21.09■□□□□ 0.97
DNMT3A-206ENST00000406659 CALCRP30988 508 aa21.08■□□□□ 0.97
DNMT3A-206ENST00000406659 IKZF1Q13422 519 aa21.08■□□□□ 0.97
DNMT3A-206ENST00000406659 DHRS11Q6UWP2 260 aa21.08■□□□□ 0.97
DNMT3A-206ENST00000406659 BEND4Q6ZU67 534 aa21.08■□□□□ 0.97
DNMT3A-206ENST00000406659 BHLHA15Q7RTS1 189 aaPredicted RBP21.08■□□□□ 0.97
DNMT3A-206ENST00000406659 COQ8AQ8NI60 647 aa21.08■□□□□ 0.97
DNMT3A-206ENST00000406659 AKAP13Q12802 2813 aa21.08■□□□□ 0.97
DNMT3A-206ENST00000406659 TRAV14DV4A0A0A6YYC5 116 aa21.08■□□□□ 0.96
DNMT3A-206ENST00000406659 A0A0B4J2A0 478 aa21.08■□□□□ 0.96
DNMT3A-206ENST00000406659 C5orf51A6NDU8 294 aa21.08■□□□□ 0.96
DNMT3A-206ENST00000406659 DBX1A6NMT0 343 aa21.08■□□□□ 0.96
DNMT3A-206ENST00000406659 J3QT63 122 aa21.08■□□□□ 0.96
DNMT3A-206ENST00000406659 IFNA7P01567 189 aa21.08■□□□□ 0.96
DNMT3A-206ENST00000406659 PTGER4P35408 488 aa21.08■□□□□ 0.96
DNMT3A-206ENST00000406659 GTF3C1Q12789 2109 aa21.08■□□□□ 0.96
DNMT3A-206ENST00000406659 C1orf185Q5T7R7 199 aa21.08■□□□□ 0.96
DNMT3A-206ENST00000406659 ZNF660Q6AZW8 331 aaPredicted RBP21.08■□□□□ 0.96
DNMT3A-206ENST00000406659 UNQ6126/PRO20091Q6UXV3 157 aa21.08■□□□□ 0.96
DNMT3A-206ENST00000406659 LINC00596Q86U02 117 aa21.08■□□□□ 0.96
DNMT3A-206ENST00000406659 OBP2BQ9NPH6 170 aa21.08■□□□□ 0.96
DNMT3A-206ENST00000406659 IL36RNQ9UBH0 155 aa21.08■□□□□ 0.96
DNMT3A-206ENST00000406659 SHPKQ9UHJ6 478 aa21.08■□□□□ 0.96
DNMT3A-206ENST00000406659 CACNA1GO43497 2377 aa21.07■□□□□ 0.96
DNMT3A-206ENST00000406659 KNG1P01042 644 aa21.07■□□□□ 0.96
DNMT3A-206ENST00000406659 S100A11P31949 105 aa21.07■□□□□ 0.96
DNMT3A-206ENST00000406659 SUPT4H1P63272 117 aaKnown RBP21.07■□□□□ 0.96
DNMT3A-206ENST00000406659 KRTCAP3Q53RY4 240 aa21.07■□□□□ 0.96
DNMT3A-206ENST00000406659 GSG1LQ6UXU4 331 aa21.07■□□□□ 0.96
DNMT3A-206ENST00000406659 TMUB2Q71RG4 321 aa21.07■□□□□ 0.96
DNMT3A-206ENST00000406659 ZNF488Q96MN9 340 aa21.07■□□□□ 0.96
DNMT3A-206ENST00000406659 RCC2Q9P258 522 aaKnown RBP21.07■□□□□ 0.96
DNMT3A-206ENST00000406659 C13orf42A0A1B0GVH6 325 aa21.06■□□□□ 0.96
DNMT3A-206ENST00000406659 IQCF6A8MYZ5 107 aa21.06■□□□□ 0.96
DNMT3A-206ENST00000406659 CTSDP07339 412 aaPredicted RBP21.06■□□□□ 0.96
DNMT3A-206ENST00000406659 EIF2S3LQ2VIR3 472 aaKnown RBP21.06■□□□□ 0.96
DNMT3A-206ENST00000406659 FAM180AQ6UWF9 173 aa21.06■□□□□ 0.96
DNMT3A-206ENST00000406659 FAM58AQ8N1B3 248 aa21.06■□□□□ 0.96
DNMT3A-206ENST00000406659 NEK7Q8TDX7 302 aa21.06■□□□□ 0.96
DNMT3A-206ENST00000406659 DHRS9Q9BPW9 319 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms