RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ARSKQ6UWY0 536 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 IZUMO2Q6UXV1 221 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 STAC2Q6ZMT1 411 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF584Q8IVC4 421 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 BPIFB2Q8N4F0 458 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 DHRSXQ8N5I4 330 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 TMEM251Q8N6I4 163 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 FAM83FQ8NEG4 500 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 MFSD8Q8NHS3 518 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 MAGEE2Q8TD90 523 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 OSTF1Q92882 214 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 PINX1Q96BK5 328 aaKnown RBP3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 DDIT4LQ96D03 193 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 SGTBQ96EQ0 304 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 KLHDC3Q9BQ90 382 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 GABARAPL3Q9BY60 117 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 HES7Q9BYE0 225 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 TTTY12Q9BZ98 90 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 UCK2Q9BZX2 261 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 COMMD4Q9H0A8 199 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 SLITRK2Q9H156 845 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 Q9H521 79 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 PRORYQ9H606 182 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZDHHC11Q9H8X9 412 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 FANCFQ9NPI8 374 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 NANSQ9NR45 359 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF275Q9NSD4 429 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 MRPL39Q9NYK5 338 aaKnown RBP3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF229Q9UJW7 825 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 DKKL1Q9UK85 242 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 TP53TG3Q9ULZ0 132 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 SIGLEC7Q9Y286 467 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF337Q9Y3M9 751 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 AP4B1Q9Y6B7 739 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 HSPE1-MOB4S4R3N1 261 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 RTTNQ86VV8 2226 aa3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 DIDO1Q9BTC0 2240 aaKnown RBP3.63□□□□□ -1.83
HMGB3P19-201ENST00000403971 HEATR1Q9H583 2144 aaKnown RBP3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 PRRC2CQ9Y520 2896 aaKnown RBP3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 TMEM72A0PK05 275 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 CDC42EP2O14613 210 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 ARPC3O15145 178 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 DENRO43583 198 aaKnown RBP3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 MPZL2O60487 215 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 EIF1BO60739 113 aaKnown RBP3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 RAMP1O60894 148 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR7A10O76100 309 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 NDUFB2O95178 105 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 VAMP5O95183 116 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 SNAP29O95721 258 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 F10P00742 488 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 BGLAPP02818 100 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 HMGN1P05114 100 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 MAGEA5P43359 124 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 GPR4P46093 362 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 MEOX2P50222 304 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 CRISP1P54107 249 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 NUP107P57740 925 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 CDK5Q00535 292 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 PLGLB1Q02325 96 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 CD47Q08722 323 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 LINC00303Q3SY05 128 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 SLC36A3Q495N2 470 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZBED5Q49AG3 693 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 RAET1LQ5VY80 246 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 SMARCD3Q6STE5 483 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF620Q6ZNG0 422 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 TMPPEQ6ZT21 453 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 OAFQ86UD1 273 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 C11orf42Q8N5U0 333 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF555Q8NEP9 628 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR5J2Q8NH18 312 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 PFN4Q8NHR9 129 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 TEX47Q8TBZ9 253 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 TRUB1Q8WWH5 349 aaKnown RBP3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 ARL5BQ96KC2 179 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 JSRP1Q96MG2 331 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 GPX7Q96SL4 187 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 PITX2Q99697 317 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 GPA33Q99795 319 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 NIPSNAP1Q9BPW8 284 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 PAXXQ9BUH6 204 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 TAPBPLQ9BX59 468 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 ANKRD60Q9BZ19 345 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 PRRG3Q9BZD7 231 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 NDEL1Q9GZM8 345 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR52D1Q9H346 318 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 CALHM2Q9HA72 323 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 PAQR5Q9NXK6 330 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 B9D1Q9UPM9 204 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 BAIAP2Q9UQB8 552 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 CDH10Q9Y6N8 788 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 NBASA2RRP1 2371 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 HIVEP3Q5T1R4 2406 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 ATRXP46100 2492 aa3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 RAI1Q7Z5J4 1906 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P19-201ENST00000403971 DSPP15924 2871 aaKnown RBP3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 TRGV5A0A0B4J1U4 118 aa3.61□□□□□ -1.83
HMGB3P19-201ENST00000403971 A0A0J9YW62 118 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms