RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 RTN4IP1Q8WWV3 396 aaPredicted RBP11.28□□□□□ -0.6
PRAME-203ENST00000402697 MAFIPQ8WZ33 124 aa11.28□□□□□ -0.6
PRAME-203ENST00000402697 GTF3AQ92664 365 aaKnown RBP11.28□□□□□ -0.6
PRAME-203ENST00000402697 NARS2Q96I59 477 aaKnown RBP11.28□□□□□ -0.6
PRAME-203ENST00000402697 SULT4A1Q9BR01 284 aa11.28□□□□□ -0.6
PRAME-203ENST00000402697 AIFM2Q9BRQ8 373 aa11.28□□□□□ -0.6
PRAME-203ENST00000402697 SEC11CQ9BY50 192 aa11.28□□□□□ -0.6
PRAME-203ENST00000402697 TAF9BQ9HBM6 251 aa11.28□□□□□ -0.6
PRAME-203ENST00000402697 DEPPQ9NTK1 212 aa11.28□□□□□ -0.6
PRAME-203ENST00000402697 A0A1W2PNU3 283 aaPredicted RBP11.27□□□□□ -0.61
PRAME-203ENST00000402697 MSGN1A6NI15 193 aa11.27□□□□□ -0.61
PRAME-203ENST00000402697 TRIM77I1YAP6 450 aa11.27□□□□□ -0.61
PRAME-203ENST00000402697 SPRY1O43609 319 aaPredicted RBP11.27□□□□□ -0.61
PRAME-203ENST00000402697 IL13RA2Q14627 380 aa11.27□□□□□ -0.61
PRAME-203ENST00000402697 PABPC1L2AQ5JQF8 200 aa11.27□□□□□ -0.61
PRAME-203ENST00000402697 TMEM164Q5U3C3 297 aa11.27□□□□□ -0.61
PRAME-203ENST00000402697 ABHD17BQ5VST6 288 aa11.27□□□□□ -0.61
PRAME-203ENST00000402697 LIAT1Q6ZQX7 453 aa11.27□□□□□ -0.61
PRAME-203ENST00000402697 LINC00596Q86U02 117 aa11.27□□□□□ -0.61
PRAME-203ENST00000402697 UBAC2Q8NBM4 344 aa11.27□□□□□ -0.61
PRAME-203ENST00000402697 CLRN3Q8NCR9 226 aa11.27□□□□□ -0.61
PRAME-203ENST00000402697 OR2M7Q8NG81 312 aa11.27□□□□□ -0.61
PRAME-203ENST00000402697 TSNAXQ99598 290 aaKnown RBP11.27□□□□□ -0.61
PRAME-203ENST00000402697 REPIN1Q9BWE0 567 aaKnown RBP11.27□□□□□ -0.61
PRAME-203ENST00000402697 PARP11Q9NR21 331 aa11.27□□□□□ -0.61
PRAME-203ENST00000402697 STARD10Q9Y365 291 aa11.27□□□□□ -0.61
PRAME-203ENST00000402697 TMED3Q9Y3Q3 217 aa11.27□□□□□ -0.61
PRAME-203ENST00000402697 KNTC1P50748 2209 aa11.27□□□□□ -0.61
PRAME-203ENST00000402697 ZNF705EA8MWA4 302 aaPredicted RBP11.26□□□□□ -0.61
PRAME-203ENST00000402697 ZNF587BE7ETH6 402 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 DNASE2O00115 360 aaPredicted RBP11.26□□□□□ -0.61
PRAME-203ENST00000402697 TOR1AO14656 332 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 GLAP06280 429 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 CTXN2P0C2S0 81 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 JMJD7P0C870 316 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 CTRB1P17538 263 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 ARR3P36575 388 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 ZNF169Q14929 603 aaPredicted RBP11.26□□□□□ -0.61
PRAME-203ENST00000402697 MPV17LQ2QL34 196 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 CTRB2Q6GPI1 263 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 PIGCQ92535 297 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 APOBEC3DQ96AK3 386 aaPredicted RBP11.26□□□□□ -0.61
PRAME-203ENST00000402697 ABHD14BQ96IU4 210 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 RSRP1Q9BUV0 290 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 RIMS4Q9H426 269 aaPredicted RBP11.26□□□□□ -0.61
PRAME-203ENST00000402697 PLK3Q9H4B4 646 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 ZNF703Q9H7S9 590 aaPredicted RBP11.26□□□□□ -0.61
PRAME-203ENST00000402697 COQ3Q9NZJ6 369 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 DOCK10Q96BY6 2186 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 BORCS7-ASMTA0A0B4J1R7 106 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 IGKV1-12A0A0C4DH73 117 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 DUXBA0A1W2PPF3 345 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 C9orf172C9J069 976 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 GEMIN2O14893 280 aaKnown RBP11.26□□□□□ -0.61
PRAME-203ENST00000402697 SNAPINO95295 136 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 IGKV1D-12P01611 117 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 H2AFB1P0C5Y9 115 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 DUSP1P28562 367 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 CAV2P51636 162 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 HERV-K104P61576 105 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 RND3P61587 244 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 RNPS1Q15287 305 aaKnown RBP11.26□□□□□ -0.61
PRAME-203ENST00000402697 TMEM268Q5VZI3 342 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 SUMF1Q8NBK3 374 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 ZNF775Q96BV0 537 aaPredicted RBP11.26□□□□□ -0.61
PRAME-203ENST00000402697 THOC3Q96J01 351 aaKnown RBP11.26□□□□□ -0.61
PRAME-203ENST00000402697 C18orf12Q96KH6 178 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 HDHD3Q9BSH5 251 aaPredicted RBP11.26□□□□□ -0.61
PRAME-203ENST00000402697 ARV1Q9H2C2 271 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 RHOFQ9HBH0 211 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 SPACA1Q9HBV2 294 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 ACKR4Q9NPB9 350 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 TMEM9BQ9NQ34 198 aa11.26□□□□□ -0.61
PRAME-203ENST00000402697 PURGQ9UJV8 347 aaKnown RBP11.26□□□□□ -0.61
PRAME-203ENST00000402697 PQLC2LA1A4F0 135 aa11.25□□□□□ -0.61
PRAME-203ENST00000402697 CDS2O95674 445 aa11.25□□□□□ -0.61
PRAME-203ENST00000402697 EDN3P14138 238 aa11.25□□□□□ -0.61
PRAME-203ENST00000402697 FCGR2CP31995 323 aa11.25□□□□□ -0.61
PRAME-203ENST00000402697 P2RY1P47900 373 aa11.25□□□□□ -0.61
PRAME-203ENST00000402697 LHX2P50458 406 aa11.25□□□□□ -0.61
PRAME-203ENST00000402697 RAB5CP51148 216 aa11.25□□□□□ -0.61
PRAME-203ENST00000402697 F2RL1P55085 397 aa11.25□□□□□ -0.61
PRAME-203ENST00000402697 HMGN3Q15651 99 aa11.25□□□□□ -0.61
PRAME-203ENST00000402697 MKXQ8IYA7 352 aa11.25□□□□□ -0.61
PRAME-203ENST00000402697 ABHD3Q8WU67 409 aa11.25□□□□□ -0.61
PRAME-203ENST00000402697 MS4A7Q9GZW8 240 aaPredicted RBP11.25□□□□□ -0.61
PRAME-203ENST00000402697 SLC2A9Q9NRM0 540 aa11.25□□□□□ -0.61
PRAME-203ENST00000402697 NCKAP5O14513 1909 aa11.24□□□□□ -0.61
PRAME-203ENST00000402697 GPR137BO60478 399 aa11.24□□□□□ -0.61
PRAME-203ENST00000402697 SEC11BP0C7V7 166 aa11.24□□□□□ -0.61
PRAME-203ENST00000402697 FGF12P61328 243 aa11.24□□□□□ -0.61
PRAME-203ENST00000402697 CEACAM21Q3KPI0 293 aa11.24□□□□□ -0.61
PRAME-203ENST00000402697 DMRTC1Q5HYR2 192 aa11.24□□□□□ -0.61
PRAME-203ENST00000402697 TSPO2Q5TGU0 170 aa11.24□□□□□ -0.61
PRAME-203ENST00000402697 SLC22A25Q6T423 547 aa11.24□□□□□ -0.61
PRAME-203ENST00000402697 ZNF611Q8N823 705 aa11.24□□□□□ -0.61
PRAME-203ENST00000402697 SPIN2AQ99865 258 aa11.24□□□□□ -0.61
PRAME-203ENST00000402697 MICU1Q9BPX6 476 aa11.24□□□□□ -0.61
PRAME-203ENST00000402697 SPIN2BQ9BPZ2 258 aa11.24□□□□□ -0.61
PRAME-203ENST00000402697 FAM212BQ9NTI7 297 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms