RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 ATP1B3P54709 279 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 MTCP1P56278 107 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 BPIFB3P59826 476 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 ACTA2P62736 377 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 RPL31P62899 125 aaKnown RBP4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 ACTG2P63267 376 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 COL10A1Q03692 680 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 SRSF4Q08170 494 aaKnown RBP4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 RAB40BQ12829 278 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 FOXL1Q12952 345 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 CNN3Q15417 329 aaKnown RBP4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 TAF9Q16594 264 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 TMEM200BQ69YZ2 307 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 XAF1Q6GPH4 301 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 CRIP3Q6Q6R5 217 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNF782Q6ZMW2 699 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 UTS2BQ765I0 119 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 KCTD20Q7Z5Y7 419 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 WFDC3Q8IUB2 231 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 EGFL6Q8IUX8 553 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 MKXQ8IYA7 352 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNF561Q8N587 486 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 C11orf42Q8N5U0 333 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 TPRX1Q8N7U7 411 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 CCDC54Q8NEL0 328 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNF555Q8NEP9 628 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR5D18Q8NGL1 313 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 SSMEM1Q8WWF3 244 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 PP6455Q8WZ26 134 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 EMG1Q92979 244 aaKnown RBP4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 CEP19Q96LK0 163 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 Q96MT0 163 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 NKX3-1Q99801 234 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 PDCD1LG2Q9BQ51 273 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 METTL8Q9H825 291 aaKnown RBP4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 UNKLQ9H9P5 680 aaKnown RBP4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 NOX4Q9NPH5 578 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 C1RLQ9NZP8 487 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 HHLA2Q9UM44 414 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 FAM96BQ9Y3D0 163 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 RPL36Q9Y3U8 105 aaKnown RBP4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 K7N7A8 449 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 M0R1W7 72 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 SIRPB1O00241 398 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 GPR137BO60478 399 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNF737O75373 536 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZFPL1O95159 310 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 HAND1O96004 215 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 PAHP00439 452 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 CHRM2P08172 466 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 FBP1P09467 338 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 GNAO1P09471 354 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 OCM2P0CE71 109 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 OCMP0CE72 109 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 JUNBP17275 347 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 PRKACAP17612 351 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 PRKACBP22694 351 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 IER3P46695 156 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 SOX2P48431 317 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 BMXP51813 675 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 UBE2E1P51965 193 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 GBX2P52951 348 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 DLX6P56179 175 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 EDDM3BP56851 147 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 IL18R1Q13478 541 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 BLMHQ13867 455 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 EDDM3AQ14507 147 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 KLHL22Q53GT1 634 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR2G6Q5TZ20 316 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNF691Q5VV52 312 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 METAP1DQ6UB28 335 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 LHFPL2Q6ZUX7 228 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 TCF23Q7RTU1 214 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 LDLRAD3Q86YD5 345 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 FAM58AQ8N1B3 248 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 SYS1Q8N2H4 156 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 TMEM86BQ8N661 226 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 DNAAF1Q8NEP3 725 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR52N4Q8NGI2 321 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR51A2Q8NGJ7 313 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR13C5Q8NGS8 318 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR5AK2Q8NH90 309 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 TBC1D15Q8TC07 691 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 TSEN15Q8WW01 171 aaKnown RBP4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 RGP1Q92546 391 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 C10orf35Q96D05 121 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 ORAI1Q96D31 301 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 MRPL48Q96GC5 212 aaKnown RBP4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 AJUBAQ96IF1 538 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 DMRTB1Q96MA1 342 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 RDH12Q96NR8 316 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 OPALINQ96PE5 141 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNF747Q9BV97 191 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 CHST6Q9GZX3 395 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 NEK6Q9HC98 313 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 FGF20Q9NP95 211 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 MRPS18AQ9NVS2 196 aaKnown RBP4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNRD1Q9P1U0 126 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 CLEC2DQ9UHP7 191 aa4.7□□□□□ -1.66
HMGB1P20-201ENST00000402555 SIRT4Q9Y6E7 314 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms