RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 RNASEK-C17orf49H0YIS7 233 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 K7ERQ8 282 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 CDIPTO14735 213 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 OR2A4O95047 310 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 FADS2O95864 444 aaKnown RBP1.39□□□□□ -2.19
CD47-203ENST00000398258 RLN2P04090 185 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 SEC11BP0C7V7 166 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 CECR9P0C854 216 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 HLA-DMAP28067 261 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 TTPAP49638 278 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 TSPAN5P62079 268 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 VSNL1P62760 191 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 RBX1P62877 108 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 TNNC1P63316 161 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 ELOCQ15369 112 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 ZBTB6Q15916 424 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 SSX1Q16384 188 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 TMEM215Q68D42 235 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 TMEM136Q6ZRR5 245 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 DAZ4Q86SG3 579 aaKnown RBP1.39□□□□□ -2.19
CD47-203ENST00000398258 CYP4Z1Q86W10 505 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 RPRMLQ8N4K4 120 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 C1orf64Q8NEQ6 169 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 ITLN2Q8WWU7 325 aaPredicted RBP1.39□□□□□ -2.19
CD47-203ENST00000398258 CCL17Q92583 94 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 ZNF75AQ96N20 296 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 OR2A7Q96R45 310 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 COPS4Q9BT78 406 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 LHX5Q9H2C1 402 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 OR52A5Q9H2C5 316 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 DAZ1Q9NQZ3 744 aaKnown RBP1.39□□□□□ -2.19
CD47-203ENST00000398258 TMEM38BQ9NVV0 291 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 TAC3Q9UHF0 121 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 POFUT2Q9Y2G5 429 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 SLC22A7Q9Y694 548 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 USH1CQ9Y6N9 552 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 TRIP11Q15643 1979 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 NRCAMQ92823 1304 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 ADAMTSL3P82987 1691 aa1.39□□□□□ -2.19
CD47-203ENST00000398258 NEMFO60524 1076 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 KCNK2O95069 426 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 BRI3O95415 125 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 IGKV1-17P01599 117 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 CDK1P06493 297 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 PFN1P07737 140 aaKnown RBP1.38□□□□□ -2.19
CD47-203ENST00000398258 ELK4P28324 431 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 IMPA1P29218 277 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 SLC6A1P30531 599 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 RANBP1P43487 201 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 LGALS7P47929 136 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 TUFMP49411 452 aaKnown RBP1.38□□□□□ -2.19
CD47-203ENST00000398258 NUDT2P50583 147 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 RPS11P62280 158 aaKnown RBP eCLIP1.38□□□□□ -2.19
CD47-203ENST00000398258 FLI1Q01543 452 aaPredicted RBP1.38□□□□□ -2.19
CD47-203ENST00000398258 CD164Q04900 197 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 STX4Q12846 297 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 ZNF235Q14590 738 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 SSX6Q7RTT6 188 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 DRAXINQ8NBI3 349 aaPredicted RBP1.38□□□□□ -2.19
CD47-203ENST00000398258 OR4K17Q8NGC6 315 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 BLNKQ8WV28 456 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 RORBQ92753 470 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 ZNF396Q96N95 335 aaPredicted RBP1.38□□□□□ -2.19
CD47-203ENST00000398258 TRIM45Q9H8W5 580 aaPredicted RBP1.38□□□□□ -2.19
CD47-203ENST00000398258 DIABLOQ9NR28 239 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 SDHAF3Q9NRP4 125 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 INIPQ9NRY2 104 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 DNAJC27Q9NZQ0 273 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 RBM12B-AS1Q9P1G2 102 aa1.38□□□□□ -2.19
CD47-203ENST00000398258 MRM2Q9UI43 246 aaKnown RBP1.38□□□□□ -2.19
CD47-203ENST00000398258 SEC16AO15027 2179 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 TICRRQ7Z2Z1 1910 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 IGKV1D-17A0A075B6S4 117 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 IGHV3-43A0A0B4J1X8 118 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 A0A1B0GW15 77 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 PGPA6NDG6 321 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 RBFOX3A6NFN3 312 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 OR6C70A6NIJ9 312 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 IGLL5B9A064 214 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 M0QX08 132 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 CRXO43186 299 aaPredicted RBP1.37□□□□□ -2.19
CD47-203ENST00000398258 COX7A2P2O60397 106 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 SHOX2O60902 331 aaPredicted RBP1.37□□□□□ -2.19
CD47-203ENST00000398258 CNMDO75829 334 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 DHRS3O75911 302 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 MYO1DO94832 1006 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 CA2P00918 260 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 IGHG2P01859 326 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 PTHLHP12272 177 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 COL8A2P25067 703 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 CNTFRP26992 372 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 SPAM1P38567 509 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 XKP51811 444 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 IL15RAQ13261 267 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 STX3Q13277 289 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 ENDOGQ14249 297 aaKnown RBP1.37□□□□□ -2.19
CD47-203ENST00000398258 GPR176Q14439 515 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 USF2Q15853 346 aaPredicted RBP1.37□□□□□ -2.19
CD47-203ENST00000398258 CEACAM21Q3KPI0 293 aa1.37□□□□□ -2.19
CD47-203ENST00000398258 HBMQ6B0K9 141 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms