RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 KLF9Q13886 244 aaPredicted RBP16.46■□□□□ 0.23
PDLIM2-205ENST00000397761 SWI5Q1ZZU3 235 aa16.46■□□□□ 0.23
PDLIM2-205ENST00000397761 SPRNQ5BIV9 151 aa16.46■□□□□ 0.23
PDLIM2-205ENST00000397761 ZNF826PQ6ZT77 177 aa16.46■□□□□ 0.23
PDLIM2-205ENST00000397761 RCC2Q9P258 522 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-205ENST00000397761 KLK11Q9UBX7 282 aa16.46■□□□□ 0.23
PDLIM2-205ENST00000397761 PLEKHA6Q9Y2H5 1048 aa16.46■□□□□ 0.23
PDLIM2-205ENST00000397761 LRBAP50851 2863 aa16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 IGHV3-64DA0A0J9YX35 117 aa16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 PDCD6O75340 191 aa16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 PTTG1O95997 202 aa16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 PRKACAP17612 351 aa16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 TNFAIP6P98066 277 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 SRSF1Q07955 248 aaKnown RBP eCLIP16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 OXA1LQ15070 435 aa16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 RNASE12Q5GAN4 147 aaKnown RBP16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 FAM209AQ5JX71 171 aa16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 OLFML2AQ68BL7 652 aa16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 POC5Q8NA72 575 aa16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 Q8TCH9 128 aa16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 ITLN1Q8WWA0 313 aa16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 EMG1Q92979 244 aaKnown RBP16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 ERGIC1Q969X5 290 aa16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 ZNF581Q9P0T4 197 aa16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 IL36RNQ9UBH0 155 aa16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 DOPEY2Q9Y3R5 2298 aa16.45■□□□□ 0.22
PDLIM2-205ENST00000397761 ANKRD20A5PA0PJZ0 165 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 A6NLC8 198 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 VGLL3A8MV65 326 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 H3BUI4 141 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 SSX5O60225 188 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 RBBP9O75884 186 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 GOSR1O95249 250 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 FUT3P21217 361 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 DYRK1AQ13627 763 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 ZNF146Q15072 292 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 SPIN3Q5JUX0 258 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 C6orf201Q7Z4U5 140 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 BATF2Q8N1L9 274 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 MINDY2Q8NBR6 621 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 DEDD2Q8WXF8 326 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 MS4A5Q9H3V2 200 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 FN3KRPQ9HA64 309 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 UFSP2Q9NUQ7 469 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 C1orf123Q9NWV4 160 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 ZNF107Q9UII5 783 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 ANAPC10Q9UM13 185 aa16.44■□□□□ 0.22
PDLIM2-205ENST00000397761 SRRM5B3KS81 715 aa16.43■□□□□ 0.22
PDLIM2-205ENST00000397761 ECDO95905 644 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-205ENST00000397761 INPP1P49441 399 aa16.43■□□□□ 0.22
PDLIM2-205ENST00000397761 ACTBP60709 375 aa16.43■□□□□ 0.22
PDLIM2-205ENST00000397761 ACTG1P63261 375 aa16.43■□□□□ 0.22
PDLIM2-205ENST00000397761 TESK1Q15569 626 aa16.43■□□□□ 0.22
PDLIM2-205ENST00000397761 TOMM5Q8N4H5 51 aa16.43■□□□□ 0.22
PDLIM2-205ENST00000397761 NUDCD2Q8WVJ2 157 aa16.43■□□□□ 0.22
PDLIM2-205ENST00000397761 CYYR1Q96J86 154 aa16.43■□□□□ 0.22
PDLIM2-205ENST00000397761 NEDD4LQ96PU5 975 aa16.43■□□□□ 0.22
PDLIM2-205ENST00000397761 C11orf54Q9H0W9 315 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-205ENST00000397761 GCM1Q9NP62 436 aa16.43■□□□□ 0.22
PDLIM2-205ENST00000397761 PLEKHJ1Q9NW61 149 aa16.43■□□□□ 0.22
PDLIM2-205ENST00000397761 RASL12Q9NYN1 266 aa16.43■□□□□ 0.22
PDLIM2-205ENST00000397761 TAS2R8Q9NYW2 309 aa16.43■□□□□ 0.22
PDLIM2-205ENST00000397761 CLEC18AA5D8T8 446 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 OR7C1O76099 320 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 NXPH2O95156 264 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 LHBP01229 141 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 GSTT2BP0CG30 244 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 RFX2P48378 723 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 ZNF57Q68EA5 555 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 Q6P435 159 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 CLEC18BQ6UXF7 455 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 ACP7Q6ZNF0 438 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 MOGAT3Q86VF5 341 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 MUC15Q8N387 334 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 CLEC18CQ8NCF0 446 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 LRRC29Q8WV35 223 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 SULT4A1Q9BR01 284 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 OCSTAMPQ9BR26 566 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 C7orf50Q9BRJ6 194 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 SPACA1Q9HBV2 294 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 LYRM1O43325 122 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 GLAP06280 429 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 CSF1P09603 554 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 TNFRSF1AP19438 455 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 GNG2P59768 71 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 AP3S2P59780 193 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 PCGF3Q3KNV8 242 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 DCDC5Q6ZRR9 648 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 GDPD3Q7L5L3 318 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 FAM90A1Q86YD7 464 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 GCSAMQ8N6F7 178 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 FBXW5Q969U6 566 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 WDR13Q9H1Z4 485 aa16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 SEBOXQ9HB31 216 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-205ENST00000397761 A0A1W2PPR1 153 aa16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 A6NNC1 897 aa16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 C3orf80F5H4A9 247 aa16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 HS3ST1O14792 307 aa16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 NAT1P18440 290 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms