RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ENDOGQ14249 297 aaKnown RBP4.82□□□□□ -1.64
PTPRD-205ENST00000397611 KIAA0895LQ68EN5 471 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 REC114Q7Z4M0 266 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 WDR5BQ86VZ2 330 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 OR1N1Q8NGS0 311 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 RTN4IP1Q8WWV3 396 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-205ENST00000397611 TMEM9BQ9NQ34 198 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 PIGLQ9Y2B2 252 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 SHANK1Q9Y566 2161 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 DDAH2O95865 285 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 CD27P26842 260 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 FGF8P55075 233 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-205ENST00000397611 DHRS7BQ6IAN0 325 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-205ENST00000397611 SLC16A14Q7RTX9 510 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 HOGA1Q86XE5 327 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 PARP11Q9NR21 331 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 TP53TG5Q9Y2B4 290 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 HDGFL3Q9Y3E1 203 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 TIMM10BQ9Y5J6 103 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 PIAS3Q9Y6X2 628 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 H3BP45 60 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 IGHG1P01857 330 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 OPRM1P35372 400 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 NHLH2Q02577 135 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 ZNF117Q03924 483 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 RAB31Q13636 194 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 CLEC18BQ6UXF7 455 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 PLXDC1Q8IUK5 500 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 RFLNBQ8N5W9 214 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 TMEM156Q8N614 296 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 KLHDC1Q8N7A1 406 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 CADM4Q8NFZ8 388 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 CMTM2Q8TAZ6 248 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 PTPMT1Q8WUK0 201 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-205ENST00000397611 CUTCQ9NTM9 273 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 COL4A2P08572 1712 aa4.82□□□□□ -1.64
PTPRD-205ENST00000397611 LAMTOR5O43504 91 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 SRSF10O75494 262 aaKnown RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 ZNF124Q15973 351 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FAM78BQ5VT40 261 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 DPPA3Q6W0C5 159 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 PRSS41Q7RTY9 318 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 D2HGDHQ8N465 521 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 SLC35G3Q8N808 338 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 RRP8O43159 456 aaKnown RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 PRKNO60260 465 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 EIF1BO60739 113 aaKnown RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 OR2J2O76002 312 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 TRGC2P03986 189 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 IGHV4-34P06331 123 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 GABRA2P47869 451 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 CSNK1A1P48729 337 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 EFNB2P52799 333 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FAM3AP98173 230 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FOXO1Q12778 655 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 NSDHLQ15738 373 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 DOK3Q7L591 496 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 ADAD2Q8NCV1 583 aaKnown RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 OR4N2Q8NGD1 307 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 OR10AC1Q8NH08 325 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 DDA1Q9BW61 102 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FUT9Q9Y231 359 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 URB1O60287 2271 aaKnown RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 METTL12A8MUP2 240 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 SEC11BP0C7V7 166 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 BMP5P22003 454 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 OR10J1P30954 320 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 OTX1P32242 354 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 CD81P60033 236 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 OR13H1Q8NG92 308 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 RHBDD1Q8TEB9 315 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 SPSB1Q96BD6 273 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 REEP6Q96HR9 211 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 C1orf147Q96MC9 270 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 ZNF331Q9NQX6 463 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 LYRM2Q9NU23 88 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 HELZP42694 1942 aaKnown RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 MTCL1Q9Y4B5 1905 aaKnown RBP4.81□□□□□ -1.64
PTPRD-205ENST00000397611 VSIG8P0DPA2 414 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 DTYMKP23919 212 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 CHRNA7P36544 502 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 GABREP78334 506 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 MSMO1Q15800 293 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 THEM4Q5T1C6 240 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 GTF2H5Q6ZYL4 71 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 C9orf40Q8IXQ3 194 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 SLC38A9Q8NBW4 561 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 OR52N4Q8NGI2 321 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 OR51F2Q8NH61 342 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 NRTNQ99748 197 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 GVINP1Q7Z2Y8 2422 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FAM90A10PA6NDY2 464 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FAM90A18PA6NE21 464 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FAM90A16PA6NEW6 464 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FAM90A20PA6NIJ5 464 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FAM90A8PA6NJQ4 464 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FAM90A7PA6NKC0 464 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FAM90A22PA8MWA6 464 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FAM90A12PA8MX19 464 aa4.81□□□□□ -1.64
PTPRD-205ENST00000397611 FAM90A5PA8MXJ8 464 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms