RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 TMEM200BQ69YZ2 307 aa11.41□□□□□ -0.58
SEC13-204ENST00000397099 CHST4Q8NCG5 386 aa11.41□□□□□ -0.58
SEC13-204ENST00000397099 BEND2Q8NDZ0 799 aa11.41□□□□□ -0.58
SEC13-204ENST00000397099 OR51A4Q8NGJ6 313 aa11.41□□□□□ -0.58
SEC13-204ENST00000397099 GPR148Q8TDV2 347 aa11.41□□□□□ -0.58
SEC13-204ENST00000397099 CHIAQ9BZP6 476 aa11.41□□□□□ -0.58
SEC13-204ENST00000397099 ISG20L2Q9H9L3 353 aaKnown RBP11.41□□□□□ -0.58
SEC13-204ENST00000397099 ELL3Q9HB65 397 aaPredicted RBP11.41□□□□□ -0.58
SEC13-204ENST00000397099 C19orf12Q9NSK7 152 aa11.41□□□□□ -0.58
SEC13-204ENST00000397099 ZNRD1Q9P1U0 126 aa11.41□□□□□ -0.58
SEC13-204ENST00000397099 AASSQ9UDR5 926 aa11.41□□□□□ -0.58
SEC13-204ENST00000397099 DIMT1Q9UNQ2 313 aaKnown RBP11.41□□□□□ -0.58
SEC13-204ENST00000397099 EFCAB10A6NFE3 127 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 MGST3O14880 152 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 CASQ2O14958 399 aaPredicted RBP11.4□□□□□ -0.58
SEC13-204ENST00000397099 SULT1B1O43704 296 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 KDM4BO94953 1096 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 TFF1P04155 84 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 HCKP08631 526 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 LIMS3P0CW19 117 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 LIMS4P0CW20 117 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 PIPP12273 146 aaPredicted RBP11.4□□□□□ -0.58
SEC13-204ENST00000397099 ERP29P30040 261 aaKnown RBP11.4□□□□□ -0.58
SEC13-204ENST00000397099 POU3F4P49335 361 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 LGALS4P56470 323 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 ADARB1P78563 741 aaKnown RBP11.4□□□□□ -0.58
SEC13-204ENST00000397099 PDZD9Q8IXQ8 264 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 C8orf59Q8N0T1 100 aaPredicted RBP11.4□□□□□ -0.58
SEC13-204ENST00000397099 OR13C9Q8NGT0 318 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 OR13D1Q8NGV5 346 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 TSEN15Q8WW01 171 aaKnown RBP11.4□□□□□ -0.58
SEC13-204ENST00000397099 TMEM80Q96HE8 168 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 DCLRE1BQ9H816 532 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 HMG20AQ9NP66 347 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 RAB18Q9NP72 206 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 BABAM2Q9NXR7 383 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 VPREB3Q9UKI3 123 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 LINC00312Q9Y6C7 94 aa11.4□□□□□ -0.58
SEC13-204ENST00000397099 C17orf98A8MV24 154 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 ANGPTL7O43827 346 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 ZNF728P0DKX0 622 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 PRKACAP17612 351 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 RAB3AP20336 220 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 GABRR1P24046 479 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 TGFBR2P37173 567 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 CAPGP40121 348 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 CEBPDP49716 269 aaPredicted RBP11.39□□□□□ -0.59
SEC13-204ENST00000397099 RAG2P55895 527 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 EDDM3BP56851 147 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 TAS2R43P59537 309 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 KISS1Q15726 138 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 LRRC36Q1X8D7 754 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 OGFRL1Q5TC84 451 aaPredicted RBP11.39□□□□□ -0.59
SEC13-204ENST00000397099 PXT1Q8NFP0 134 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 OR4M1Q8NGD0 313 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 OR10AC1Q8NH08 325 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 OR52N1Q8NH53 320 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 RPS4Y2Q8TD47 263 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 THRSPQ92748 146 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 TAF15Q92804 592 aaKnown RBP eCLIP11.39□□□□□ -0.59
SEC13-204ENST00000397099 ZNF714Q96N38 554 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 PDCD1LG2Q9BQ51 273 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 MEGF9Q9H1U4 602 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 EXOSC4Q9NPD3 245 aaKnown RBP11.39□□□□□ -0.59
SEC13-204ENST00000397099 RBFOX1Q9NWB1 397 aaKnown RBP11.39□□□□□ -0.59
SEC13-204ENST00000397099 CNOT2Q9NZN8 540 aaKnown RBP11.39□□□□□ -0.59
SEC13-204ENST00000397099 C1RLQ9NZP8 487 aa11.39□□□□□ -0.59
SEC13-204ENST00000397099 F8VVB4 439 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 F8VWA3 439 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 IGHV4-59P01825 116 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 ALDOBP05062 364 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 CSN2P05814 226 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 BCL3P20749 454 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 OMGP23515 440 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 LMO1P25800 156 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 MTNR1BP49286 362 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 CDK5R1Q15078 307 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 GRK1Q15835 563 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 SMN1Q16637 294 aaKnown RBP11.38□□□□□ -0.59
SEC13-204ENST00000397099 LIAT1Q6ZQX7 453 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 CNIH3Q8TBE1 160 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 FOXRED1Q96CU9 486 aaPredicted RBP11.38□□□□□ -0.59
SEC13-204ENST00000397099 SMIM19Q96E16 107 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 PCDHB16Q9NRJ7 776 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 ZNF281Q9Y2X9 895 aa11.38□□□□□ -0.59
SEC13-204ENST00000397099 UBE2J1Q9Y385 318 aaPredicted RBP11.38□□□□□ -0.59
SEC13-204ENST00000397099 TBL2Q9Y4P3 447 aaKnown RBP11.38□□□□□ -0.59
SEC13-204ENST00000397099 CLPSL1A2RUU4 121 aa11.37□□□□□ -0.59
SEC13-204ENST00000397099 E9PI62 339 aa11.37□□□□□ -0.59
SEC13-204ENST00000397099 OGG1O15527 345 aa11.37□□□□□ -0.59
SEC13-204ENST00000397099 GPR137BO60478 399 aa11.37□□□□□ -0.59
SEC13-204ENST00000397099 TMEM225BP0DP42 221 aa11.37□□□□□ -0.59
SEC13-204ENST00000397099 NPBWR2P48146 333 aa11.37□□□□□ -0.59
SEC13-204ENST00000397099 ETV1P50549 477 aa11.37□□□□□ -0.59
SEC13-204ENST00000397099 PPP3R1P63098 170 aa11.37□□□□□ -0.59
SEC13-204ENST00000397099 KLRD1Q13241 179 aa11.37□□□□□ -0.59
SEC13-204ENST00000397099 YIF1BQ5BJH7 314 aa11.37□□□□□ -0.59
SEC13-204ENST00000397099 OLFML2AQ68BL7 652 aa11.37□□□□□ -0.59
SEC13-204ENST00000397099 ELP2Q6IA86 826 aa11.37□□□□□ -0.59
SEC13-204ENST00000397099 OR52W1Q6IF63 320 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms