RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 NPIPB7O75200 414 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 SUPT3HO75486 399 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 MED6O75586 246 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 TOMM40O96008 361 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 GKN3PP0CG01 181 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 ATF1P18846 271 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 MYL12AP19105 171 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 WARSP23381 471 aaKnown RBP3.85□□□□□ -1.79
GABPB1-204ENST00000396464 PSMB9P28065 219 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 APOFQ13790 326 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 RSU1Q15404 277 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 ZNF718Q3SXZ3 478 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 PYCR3Q53H96 274 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 ACSBG2Q5FVE4 666 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 TTC32Q5I0X7 151 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 LAMTOR1Q6IAA8 161 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 UNQ9370/PRO34162Q6UXP9 181 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 GDPGP1Q6ZNW5 385 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 DHFR2Q86XF0 187 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 APLFQ8IW19 511 aaPredicted RBP3.85□□□□□ -1.79
GABPB1-204ENST00000396464 SLC22A18ASQ8N1D0 253 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 SMIM20Q8N5G0 67 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 TMEM86BQ8N661 226 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 GPR26Q8NDV2 337 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 COQ8AQ8NI60 647 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 SPPL2BQ8TCT7 592 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 UCN3Q969E3 161 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 LRRC58Q96CX6 371 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 SLC25A39Q9BZJ4 359 aaPredicted RBP3.85□□□□□ -1.79
GABPB1-204ENST00000396464 TRIM15Q9C019 465 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 SRMSQ9H3Y6 488 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 PARVBQ9HBI1 364 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 MIEF1Q9NQG6 463 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 SLC7A10Q9NS82 523 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 TAS2R5Q9NYW4 299 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 CLCF1Q9UBD9 225 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 OR12D3Q9UGF7 316 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 DKKL1Q9UK85 242 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 UGT2A1Q9Y4X1 527 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 ABCA6Q8N139 1617 aa3.85□□□□□ -1.79
GABPB1-204ENST00000396464 KIF15Q9NS87 1388 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 FRMPD1Q5SYB0 1578 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 MAST1Q9Y2H9 1570 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 IGHV3OR16-9A0A0B4J2B5 98 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 A0A1W2PQ67 120 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 SMIM1B2RUZ4 78 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 NTN3O00634 580 aaPredicted RBP3.84□□□□□ -1.79
GABPB1-204ENST00000396464 TCAPO15273 167 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 IFNA1P01562 189 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 REG1AP05451 166 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 ESDP10768 282 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 ERGP11308 486 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 GABRA1P14867 456 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 NAA20P61599 178 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 RPS23P62266 143 aaKnown RBP3.84□□□□□ -1.79
GABPB1-204ENST00000396464 DYNLL1P63167 89 aaKnown RBP3.84□□□□□ -1.79
GABPB1-204ENST00000396464 RPS21P63220 83 aaKnown RBP3.84□□□□□ -1.79
GABPB1-204ENST00000396464 HBG1P69891 147 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 HBG2P69892 147 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 BTN3A2P78410 334 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 PSG4Q00888 419 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 MS4A2Q01362 244 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 ZNF45Q02386 682 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 FZD2Q14332 565 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 QPRTQ15274 297 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 TRMT12Q53H54 448 aaKnown RBP3.84□□□□□ -1.79
GABPB1-204ENST00000396464 TMEM255AQ5JRV8 349 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 DNM1P46Q6ZS02 220 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 OAFQ86UD1 273 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 CLVS1Q8IUQ0 354 aaPredicted RBP3.84□□□□□ -1.79
GABPB1-204ENST00000396464 FAM71E2Q8N5Q1 922 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 COX18Q8N8Q8 333 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 AQP11Q8NBQ7 271 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 C11orf72Q8NBR9 251 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 ZNF485Q8NCK3 441 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 NUP37Q8NFH4 326 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 OR51S1Q8NGJ8 323 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 OR4P4Q8NGL7 312 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 OR1L8Q8NGR8 309 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 OR4X1Q8NH49 305 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 CYGBQ8WWM9 190 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 RGP1Q92546 391 aaPredicted RBP3.84□□□□□ -1.79
GABPB1-204ENST00000396464 IL22RA2Q969J5 263 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 RNF185Q96GF1 192 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 BTF3L4Q96K17 158 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 RTBDNQ9BSG5 229 aaPredicted RBP3.84□□□□□ -1.79
GABPB1-204ENST00000396464 EMC6Q9BV81 110 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 MROQ9BYG7 248 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 TRIM4Q9C037 500 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 DCSTAMPQ9H295 470 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 NMNAT1Q9HAN9 279 aaPredicted RBP3.84□□□□□ -1.79
GABPB1-204ENST00000396464 RRAGDQ9NQL2 400 aaPredicted RBP3.84□□□□□ -1.79
GABPB1-204ENST00000396464 DMAC2Q9NW81 257 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 ZNF225Q9UK10 706 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 POLR1DQ9Y2S0 133 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 OR51B4Q9Y5P0 310 aa3.84□□□□□ -1.79
GABPB1-204ENST00000396464 DUOX2Q9NRD8 1548 aa3.84□□□□□ -1.8
GABPB1-204ENST00000396464 KIDINS220Q9ULH0 1771 aa3.84□□□□□ -1.8
GABPB1-204ENST00000396464 CEP152O94986 1710 aa3.84□□□□□ -1.8
GABPB1-204ENST00000396464 BRCA1P38398 1863 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms