RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 FGF12P61328 243 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 LRRC37A5PQ49AS3 106 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 AKR1C8PQ5T2L2 129 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 TUSC5Q8IXB3 177 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF610Q8N9Z0 462 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 SECTM1Q8WVN6 248 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 SAT2Q96F10 170 aaPredicted RBP2.96□□□□□ -1.93
VPS13C-203ENST00000395896 RAB40CQ96S21 281 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 THYN1Q9P016 225 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 CLDN16Q9Y5I7 305 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 HLA-HP01893 362 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 OPN1LWP04000 364 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 FUT4P22083 530 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 CEACAM3P40198 252 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 PIGPP57054 158 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 FXYD4P59646 89 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 LRRC10Q5BKY1 277 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 IGFL3Q6UXB1 125 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 PPP1R1CQ8WVI7 109 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 NUP50Q9UKX7 468 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 FRYQ5TBA9 3013 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 TSPAN15O95858 294 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 IGHV3-9P01782 118 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 CBR1P16152 277 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 HOXD11P31277 338 aaPredicted RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 NKX2-1P43699 371 aaPredicted RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 RAB13P51153 203 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 IL24Q13007 206 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 TMPRSS7Q7RTY8 843 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 TCEAL3Q969E4 200 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 POFUT1Q9H488 388 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 OR14J1Q9UGF5 321 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 MUC3AQ02505 3323 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 TRAV38-1A0A0B4J264 116 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 UMODP07911 640 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 RPS18P62269 152 aaKnown RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 TSPO2Q5TGU0 170 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 TMEM65Q6PI78 240 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 MRGPRGQ86SM5 289 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 ROBO4Q8WZ75 1007 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 KCNJ16Q9NPI9 418 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 PDGFBP01127 241 aaPredicted RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 THY1P04216 161 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 CLEC2LP0C7M8 214 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 RPS27P42677 84 aaKnown RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 LSM11P83369 360 aaKnown RBP eCLIP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 CARTPTQ16568 116 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 FBXL14Q8N1E6 418 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 NPRL2Q8WTW4 380 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 REPIN1Q9BWE0 567 aaKnown RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 MRPL22Q9NWU5 206 aaKnown RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 CD59P13987 128 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 BMP5P22003 454 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 CCL1P22362 96 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 KIR2DS2P43631 304 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 UQCC3Q6UW78 93 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 RBMS3Q6XE24 437 aaKnown RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 C16orf47Q6ZP98 133 aaPredicted RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 TMEM185AQ8NFB2 350 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF775Q96BV0 537 aaPredicted RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 WDR13Q9H1Z4 485 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 PPP1R3CQ9UQK1 317 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 POMT1Q9Y6A1 747 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 OR5H1A6NKK0 313 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 SMLR1H3BR10 107 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 EIF4EP06730 217 aaKnown RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF16P17020 682 aaPredicted RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 FCGR2CP31995 323 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 TIMP3P35625 211 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF616Q08AN1 781 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 LAIR2Q6ISS4 152 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 MUC20Q8N307 709 aaPredicted RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 OR4D6Q8NGJ1 314 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 CHAC2Q8WUX2 184 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 ZDHHC11Q9H8X9 412 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 FAM206AQ9NX38 181 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF224Q9NZL3 707 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 TRAV8-7A0A075B6U6 113 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 MEIKINA0A087WXM9 373 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 TRBV5-7A0A0A0MS05 114 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 F6UZH7 168 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 TRIM77I1YAP6 450 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 RAB27BO00194 218 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 SCGB1D2O95969 90 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 IL11P20809 199 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 GFRA1P56159 465 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 PRDX4Q13162 271 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 RHEBQ15382 184 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 RNF167Q9H6Y7 350 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 SLC7A10Q9NS82 523 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 ITPR3Q14573 2671 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 OOEPA6NGQ2 149 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 PHF1O43189 567 aaPredicted RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 SLC25A35Q3KQZ1 300 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 TSNAXQ99598 290 aaKnown RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 NRTNQ99748 197 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 ARPC5LQ9BPX5 153 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 SULT4A1Q9BR01 284 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 GOSR2O14653 212 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 CDAP32320 146 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms