RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 PIGCQ92535 297 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 CSAG2Q9Y5P2 127 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 OTOGLQ3ZCN5 2332 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 ARHGAP21Q5T5U3 1957 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 ZNF816-ZNF321PA0A0X1KG74 233 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 RNF222A6NCQ9 220 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 KLRC4-KLRK1H3BQV0 150 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 SLC25A4P12235 298 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 RPS2P15880 293 aaKnown RBP12.05□□□□□ -0.48
SNCA-204ENST00000394989 GLRA1P23415 457 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 PLCXD3Q63HM9 321 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 BRICD5Q6PL45 260 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 RNF122Q9H9V4 155 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 PARD6AQ9NPB6 346 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 AK3Q9UIJ7 227 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 ACAA1P09110 424 aaPredicted RBP12.05□□□□□ -0.48
SNCA-204ENST00000394989 CCNOP22674 350 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 FUT6P51993 359 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 RRADP55042 308 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 ARL6IP1Q15041 203 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 MOB3CQ70IA8 216 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 OR10AD1Q8NGE0 317 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 RXFP4Q8TDU9 374 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 DYRK2Q92630 601 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 APH1AQ96BI3 265 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 SULT4A1Q9BR01 284 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 BCL2L14Q9BZR8 327 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 DEFB127Q9H1M4 99 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 ACKR4Q9NPB9 350 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 HSF4Q9ULV5 492 aa12.05□□□□□ -0.48
SNCA-204ENST00000394989 FAM186AA6NE01 2351 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 C5orf49A4QMS7 147 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 EEF1E1-BLOC1S5C9J1V9 151 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 SFT2D2O95562 160 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 CHATP28329 748 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 CALCRP30988 508 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 SRSF6Q13247 344 aaKnown RBP12.04□□□□□ -0.48
SNCA-204ENST00000394989 PPA1Q15181 289 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 SLC9A3R2Q15599 337 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 CHRFAM7AQ494W8 412 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 SPAG16Q8N0X2 631 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 FGF23Q9GZV9 251 aaPredicted RBP12.04□□□□□ -0.48
SNCA-204ENST00000394989 LIME1Q9H400 295 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 MED9Q9NWA0 146 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 NDRG3Q9UGV2 375 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 DSPP15924 2871 aaKnown RBP12.04□□□□□ -0.48
SNCA-204ENST00000394989 ZNF850A8MQ14 1090 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 MPTX1A8MV57 137 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 AGTR1P30556 359 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 SERPINF1P36955 418 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 SLC10A1Q14973 349 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 ANKRD55Q3KP44 614 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 PLEKHN1Q494U1 663 aaPredicted RBP12.04□□□□□ -0.48
SNCA-204ENST00000394989 OR5T2Q8NGG2 359 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 REPIN1Q9BWE0 567 aaKnown RBP12.04□□□□□ -0.48
SNCA-204ENST00000394989 OR2S2Q9NQN1 319 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 SPRR3Q9UBC9 169 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 A0A1B0GW55 424 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 ADAP1O75689 374 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 S100A9P06702 114 aaKnown RBP12.04□□□□□ -0.48
SNCA-204ENST00000394989 S100A6P06703 90 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 DUX4L2P0CJ85 424 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 DUX4L3P0CJ86 424 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 DUX4L4P0CJ87 422 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 DUX4L5P0CJ88 424 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 DUX4L6P0CJ89 424 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 DUX4L7P0CJ90 424 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 RTL6Q6ICC9 239 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 Q6ZPA2 131 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 TMPRSS7Q7RTY8 843 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 FBXL14Q8N1E6 418 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 OSR2Q8N2R0 312 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 SVBPQ8N300 66 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 RASL12Q9NYN1 266 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 IL36GQ9NZH8 169 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 DUX4Q9UBX2 424 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 PRSS50Q9UI38 385 aa12.04□□□□□ -0.48
SNCA-204ENST00000394989 EP300Q09472 2414 aaPredicted RBP12.03□□□□□ -0.48
SNCA-204ENST00000394989 TMEM218A2RU14 115 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 GALR2O43603 387 aaPredicted RBP12.03□□□□□ -0.48
SNCA-204ENST00000394989 ZNF345Q14585 488 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 PDCD1Q15116 288 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 KCNRGQ8N5I3 272 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 OR56B2PQ8NGI1 322 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 OR51F2Q8NH61 342 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 HRH4Q9H3N8 390 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 ZNF552Q9H707 407 aaPredicted RBP12.03□□□□□ -0.48
SNCA-204ENST00000394989 COMMD9Q9P000 198 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 ANXA10Q9UJ72 324 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 SLC7A11Q9UPY5 501 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 DOCK7Q96N67 2140 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 C13orf42A0A1B0GVH6 325 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 SS18L1O75177 396 aaPredicted RBP12.03□□□□□ -0.48
SNCA-204ENST00000394989 ACTL6AO96019 429 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 NGFP01138 241 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 CD46P15529 392 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 OPRM1P35372 400 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 NPBWR2P48146 333 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 RNPS1Q15287 305 aaKnown RBP12.03□□□□□ -0.48
SNCA-204ENST00000394989 BATF2Q8N1L9 274 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms