RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 DEFB126Q9BYW3 111 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 CHST5Q9GZS9 411 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 SMCO3A2RU48 225 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 CCL3P10147 92 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 OTX1P32242 354 aaPredicted RBP13.55□□□□□ -0.24
PTBP1-204ENST00000394601 C10orf91Q5T1B1 145 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 REC114Q7Z4M0 266 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 ZIC4Q8N9L1 334 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 ERGIC1Q969X5 290 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 ZNF385AQ96PM9 386 aaKnown RBP13.55□□□□□ -0.24
PTBP1-204ENST00000394601 RNF122Q9H9V4 155 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 MRPS28Q9Y2Q9 187 aaKnown RBP13.55□□□□□ -0.24
PTBP1-204ENST00000394601 ZNF43P17038 809 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 HOXA5P20719 270 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 ALDH3B1P43353 468 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 ZFP62Q8NB50 900 aaPredicted RBP13.55□□□□□ -0.24
PTBP1-204ENST00000394601 SUMF1Q8NBK3 374 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 OR2AJ1Q8NGZ0 328 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 ANGPTL4Q9BY76 406 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 C5orf66Q9H5L9 145 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 FOXD3Q9UJU5 478 aaPredicted RBP13.55□□□□□ -0.24
PTBP1-204ENST00000394601 A6NNC1 897 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 MSTNO14793 375 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 DUS4LO95620 317 aaKnown RBP13.54□□□□□ -0.24
PTBP1-204ENST00000394601 HIST1H1DP16402 221 aaKnown RBP13.54□□□□□ -0.24
PTBP1-204ENST00000394601 TBPP20226 339 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 FAM57BQ71RH2 274 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 PACRGQ96M98 296 aaPredicted RBP13.54□□□□□ -0.24
PTBP1-204ENST00000394601 TMEM100Q9NV29 134 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 C19orf25Q9UFG5 118 aaPredicted RBP13.54□□□□□ -0.24
PTBP1-204ENST00000394601 SIT1Q9Y3P8 196 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 V9GYS6 101 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 ARHGAP21Q5T5U3 1957 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 KIAA2026Q5HYC2 2103 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 TMEM265A0A087WTH1 108 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 NTN3O00634 580 aaPredicted RBP13.54□□□□□ -0.24
PTBP1-204ENST00000394601 HIST1H1BP16401 226 aaKnown RBP13.54□□□□□ -0.24
PTBP1-204ENST00000394601 DHPSP49366 369 aaPredicted RBP13.54□□□□□ -0.24
PTBP1-204ENST00000394601 CLDN17P56750 224 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 RHEBQ15382 184 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 RSPO4Q2I0M5 234 aaPredicted RBP13.54□□□□□ -0.24
PTBP1-204ENST00000394601 VAX1Q5SQQ9 334 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 LIN37Q96GY3 246 aaPredicted RBP13.54□□□□□ -0.24
PTBP1-204ENST00000394601 FAM71F1Q96KD3 344 aaPredicted RBP13.54□□□□□ -0.24
PTBP1-204ENST00000394601 GNRHR2Q96P88 292 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 TUBA4BQ9H853 241 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 TIMM10BQ9Y5J6 103 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 TRIOBPQ9H2D6 2365 aa13.54□□□□□ -0.24
PTBP1-204ENST00000394601 MAP1BP46821 2468 aaKnown RBP13.54□□□□□ -0.24
PTBP1-204ENST00000394601 MASP2O00187 686 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 EREGO14944 169 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 SCGNO76038 276 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 CHRM2P08172 466 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 COX5BP10606 129 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 NTF4P34130 210 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 SLC35A1P78382 337 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 UBE2V2Q15819 145 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 GGNBP1Q5YKI7 109 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 PLXDC2Q6UX71 529 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 ZNF837Q96EG3 531 aaPredicted RBP13.53□□□□□ -0.24
PTBP1-204ENST00000394601 UCN2Q96RP3 112 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 ABHD14AQ9BUJ0 271 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.53□□□□□ -0.249e-7■□□□□ 10.5
PTBP1-204ENST00000394601 HS3ST3B1Q9Y662 390 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 HIST1H2BKO60814 126 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 IFNA10P01566 189 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 CD5P06127 495 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 HIST1H2BJP06899 126 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 FOLR2P14207 255 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 MMP9P14780 707 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 LIFP15018 202 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 ZNF20P17024 532 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 AMY2BP19961 511 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 HIST1H2BOP23527 126 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 HIST1H2BBP33778 126 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 SUCLG1P53597 346 aaKnown RBP13.53□□□□□ -0.24
PTBP1-204ENST00000394601 HIST1H2BDP58876 126 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 HIST1H2BCP62807 126 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 SUPT4H1P63272 117 aaKnown RBP13.53□□□□□ -0.24
PTBP1-204ENST00000394601 HIST2H2BEQ16778 126 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.53□□□□□ -0.24
PTBP1-204ENST00000394601 TSPO2Q5TGU0 170 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 DOK3Q7L591 496 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 PEG10Q86TG7 708 aaKnown RBP13.53□□□□□ -0.24
PTBP1-204ENST00000394601 LHFPL1Q86WI0 220 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 HIST1H2BHQ93079 126 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 ZNF775Q96BV0 537 aaPredicted RBP13.53□□□□□ -0.24
PTBP1-204ENST00000394601 ARHGAP5-AS1Q96IT6 56 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 HIST1H2BNQ99877 126 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 HIST1H2BMQ99879 126 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 CBLN4Q9NTU7 201 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 GPR132Q9UNW8 380 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 IGHV3-15A0A0B4J1V0 119 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 GSTP1P09211 210 aaKnown RBP13.53□□□□□ -0.24
PTBP1-204ENST00000394601 BTF3P20290 206 aaKnown RBP13.53□□□□□ -0.24
PTBP1-204ENST00000394601 FKBP2P26885 142 aaKnown RBP13.53□□□□□ -0.24
PTBP1-204ENST00000394601 HOXA6P31267 233 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 CYCSP99999 105 aaKnown RBP13.53□□□□□ -0.24
PTBP1-204ENST00000394601 IL11RAQ14626 422 aa13.53□□□□□ -0.24
PTBP1-204ENST00000394601 AADACL3Q5VUY0 350 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms