RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 TMED3Q9Y3Q3 217 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 FABP1P07148 127 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 LPAR6P43657 344 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 PSG4Q00888 419 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 ATP1A1-AS1Q5TC04 95 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 INO80CQ6PI98 192 aaPredicted RBP14.53□□□□□ -0.08
SCN3B-202ENST00000392770 SLC25A47Q6Q0C1 308 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 ZNF519Q8TB69 540 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 CORO2AQ92828 525 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 THY1P04216 161 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 TMEM267Q0VDI3 215 aaPredicted RBP14.53□□□□□ -0.08
SCN3B-202ENST00000392770 COL19A1Q14993 1142 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 SLC39A7Q92504 469 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 ADGRG7Q96K78 797 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 KPTNQ9Y664 436 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 VWA8A3KMH1 1905 aa14.52□□□□□ -0.08
SCN3B-202ENST00000392770 TRDCB7Z8K6 153 aa14.52□□□□□ -0.08
SCN3B-202ENST00000392770 LANCL1O43813 399 aa14.52□□□□□ -0.08
SCN3B-202ENST00000392770 HAND1O96004 215 aa14.52□□□□□ -0.08
SCN3B-202ENST00000392770 FGF7P21781 194 aa14.52□□□□□ -0.08
SCN3B-202ENST00000392770 OR3A1P47881 315 aa14.52□□□□□ -0.08
SCN3B-202ENST00000392770 ACOT6Q3I5F7 207 aaPredicted RBP14.52□□□□□ -0.08
SCN3B-202ENST00000392770 Q3ZCU0 254 aa14.52□□□□□ -0.08
SCN3B-202ENST00000392770 CDCP2Q5VXM1 449 aa14.52□□□□□ -0.08
SCN3B-202ENST00000392770 WDR13Q9H1Z4 485 aa14.52□□□□□ -0.08
SCN3B-202ENST00000392770 TREM2Q9NZC2 230 aa14.52□□□□□ -0.08
SCN3B-202ENST00000392770 CDIPTO14735 213 aa14.52□□□□□ -0.08
SCN3B-202ENST00000392770 DUS4LO95620 317 aaKnown RBP14.52□□□□□ -0.08
SCN3B-202ENST00000392770 MOB3BQ86TA1 216 aa14.52□□□□□ -0.08
SCN3B-202ENST00000392770 ACTR3CQ9C0K3 210 aaPredicted RBP14.52□□□□□ -0.08
SCN3B-202ENST00000392770 ANXA10Q9UJ72 324 aa14.52□□□□□ -0.08
SCN3B-202ENST00000392770 C1orf185Q5T7R7 199 aa14.52□□□□□ -0.09
SCN3B-202ENST00000392770 GGNBP1Q5YKI7 109 aa14.52□□□□□ -0.09
SCN3B-202ENST00000392770 CYB5R1Q9UHQ9 305 aa14.52□□□□□ -0.09
SCN3B-202ENST00000392770 WDR81Q562E7 1941 aa14.52□□□□□ -0.09
SCN3B-202ENST00000392770 FCGR3BO75015 233 aa14.52□□□□□ -0.09
SCN3B-202ENST00000392770 RECKO95980 971 aa14.52□□□□□ -0.09
SCN3B-202ENST00000392770 ASCL1P50553 236 aa14.52□□□□□ -0.09
SCN3B-202ENST00000392770 TGIF1Q15583 401 aa14.52□□□□□ -0.09
SCN3B-202ENST00000392770 H3F3CQ6NXT2 135 aa14.52□□□□□ -0.09
SCN3B-202ENST00000392770 SRXN1Q9BYN0 137 aa14.52□□□□□ -0.09
SCN3B-202ENST00000392770 F6UZH7 168 aa14.52□□□□□ -0.09
SCN3B-202ENST00000392770 GABRA4P48169 554 aa14.52□□□□□ -0.09
SCN3B-202ENST00000392770 PGLYRP3Q96LB9 341 aa14.52□□□□□ -0.09
SCN3B-202ENST00000392770 NKX6-2Q9C056 277 aaPredicted RBP14.52□□□□□ -0.09
SCN3B-202ENST00000392770 PRR13Q9NZ81 148 aa14.52□□□□□ -0.09
SCN3B-202ENST00000392770 KNL1Q8NG31 2342 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 UBE2L5PA0A1B0GUS4 154 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 CST7O76096 145 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 SLC25A6P12236 298 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 MPPED2Q15777 294 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 UBAC2Q8NBM4 344 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 FLVCR1-AS1Q8TAF5 88 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 ZNF629Q9UEG4 869 aaPredicted RBP14.51□□□□□ -0.09
SCN3B-202ENST00000392770 FNDC1Q4ZHG4 1894 aaPredicted RBP14.51□□□□□ -0.09
SCN3B-202ENST00000392770 LOC101059948A0A1B0GTJ6 334 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 CD3EP07766 207 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 LINC00271P0C7V0 271 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 PDZK1IP1Q13113 114 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 ZBTB37Q5TC79 503 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 TMEM123Q8N131 208 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 LYG1Q8N1E2 194 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 MED9Q9NWA0 146 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 LAIR2Q6ISS4 152 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 ZNF574Q6ZN55 896 aaPredicted RBP14.51□□□□□ -0.09
SCN3B-202ENST00000392770 CMTM2Q8TAZ6 248 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 MRPL22Q9NWU5 206 aaKnown RBP14.51□□□□□ -0.09
SCN3B-202ENST00000392770 PLA2G10O15496 165 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 PPIHO43447 177 aaKnown RBP14.51□□□□□ -0.09
SCN3B-202ENST00000392770 CYTIPO60759 359 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 CD80P33681 288 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 CRYBA2P53672 197 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 EGR4Q05215 589 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 RAB32Q13637 225 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 ZNF658BQ4V348 819 aaPredicted RBP14.51□□□□□ -0.09
SCN3B-202ENST00000392770 ZNF787Q6DD87 383 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 DYRK2Q92630 601 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 PCM1Q15154 2024 aa14.51□□□□□ -0.09
SCN3B-202ENST00000392770 FAM122CQ6P4D5 195 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 MOGAT3Q86VF5 341 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 FGF11Q92914 225 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 CACFD1Q9UGQ2 172 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 IGKV3D-11A0A0A0MRZ8 115 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 TRBV5-5A0A0J9YX44 114 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 IGHMP01871 453 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 CTSDP07339 412 aaPredicted RBP14.5□□□□□ -0.09
SCN3B-202ENST00000392770 ACKR3P25106 362 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 BTNL3Q6UXE8 466 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 OPN3Q9H1Y3 402 aaPredicted RBP14.5□□□□□ -0.09
SCN3B-202ENST00000392770 ST8SIA5O15466 376 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 ZNHIT1O43257 154 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 RAB7AP51149 207 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 COL4A6Q14031 1691 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 MBP02144 154 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 CD300CQ08708 224 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 FAM122BQ7Z309 247 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 SKA3Q8IX90 412 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 C15orf54Q8N8G6 183 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 OR5A2Q8NGI9 324 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 SMCO4Q9NRQ5 59 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms