RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 CEP55Q53EZ4 464 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 TTC32Q5I0X7 151 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 NIPAL1Q6NVV3 410 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 SCD5Q86SK9 330 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 ZCCHC24Q8N2G6 241 aaKnown RBP0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 FER1L6-AS1Q8NA97 138 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 OR10P1Q8NGE3 313 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 OR6K6Q8NGW6 343 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 ZFAND1Q8TCF1 268 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 TMBIM1Q969X1 311 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 FAM19A4Q96LR4 140 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 CHP1Q99653 195 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 ZNF251Q9BRH9 671 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 ANAPC13Q9BS18 74 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 AGMATQ9BSE5 352 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 CRACR2AQ9BSW2 395 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 TMED9Q9BVK6 235 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 CYSTM1Q9H1C7 97 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 WDR55Q9H6Y2 383 aaPredicted RBP0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 C20orf96Q9NUD7 363 aaPredicted RBP0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 NDUFB11Q9NX14 153 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 EXTL2Q9UBQ6 330 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 OR5V1Q9UGF6 321 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 PSMD13Q9UNM6 376 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 CFL2Q9Y281 166 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 OR51B2Q9Y5P1 312 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 PUS1Q9Y606 427 aaKnown RBP eCLIP0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 C2orf16Q68DN1 1984 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 PXDNLA1KZ92 1463 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 RGS12O14924 1447 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 NUP205Q92621 2012 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 COL6A6A6NMZ7 2263 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 CLUHO75153 1309 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 KCNE1BA0A087WTH5 132 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 IGKV2D-26A0A0A0MRZ7 120 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 IGHV2OR16-5A0A0B4J2B6 119 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 A0A0B4J2E0 115 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 IGKV1-9A0A0C4DH69 117 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 A0A0J9YX75 114 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 J3QT63 122 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 CPLX1O14810 134 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 BCKDKO14874 412 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 GYG2O15488 501 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 OR2F2O95006 317 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 PLEKHA8P1O95397 391 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 ERCC1P07992 297 aaPredicted RBP0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 CTLA4P16410 223 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 PRTN3P24158 256 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 CCR7P32248 378 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 GPR1P46091 355 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 RPS15P62841 145 aaKnown RBP0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 BNIP2Q12982 314 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 DEFB115Q30KQ5 88 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 LINC00303Q3SY05 128 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 FAM201AQ5SY85 155 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 C10orf91Q5T1B1 145 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 ARMC12Q5T9G4 340 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 TMEM215Q68D42 235 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 EIF3MQ7L2H7 374 aaKnown RBP0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 LUZP2Q86TE4 346 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 APRG1Q8IVJ8 170 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 DAW1Q8N136 415 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 BBS5Q8N3I7 341 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 CCNYL1Q8N7R7 359 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 INO80EQ8NBZ0 244 aaPredicted RBP0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 OR4K2Q8NGD2 314 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 ZNRF2Q8NHG8 242 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 TWIST2Q8WVJ9 160 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 GTF2H4Q92759 462 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 PEX13Q92968 403 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 CMBLQ96DG6 245 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 CPB2Q96IY4 423 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 CAPZA3Q96KX2 299 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 MBOAT7Q96N66 472 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 SPACA5Q96QH8 159 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 METTL26Q96S19 204 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 RETNLBQ9BQ08 111 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 FAM192AQ9GZU8 254 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 ARL6Q9H0F7 186 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 NEUROG2Q9H2A3 272 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 TMEM185BQ9H7F4 350 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 KCNIP2Q9NS61 270 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 TXNL4BQ9NX01 149 aaKnown RBP0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 SLC23A2Q9UGH3 650 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 TBC1D24Q9ULP9 559 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 KLF13Q9Y2Y9 288 aaPredicted RBP0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 RTEL1-TNFRSF6BF6WH68 1400 aa0.21□□□□□ -2.38
SNORD28B-201ENST00000390993 USP42Q9H9J4 1324 aaKnown RBP0.2□□□□□ -2.38
SNORD28B-201ENST00000390993 MICAL3Q7RTP6 2002 aa0.2□□□□□ -2.38
SNORD28B-201ENST00000390993 ADGRB3O60242 1522 aa0.2□□□□□ -2.38
SNORD28B-201ENST00000390993 SLIT2O94813 1529 aa0.2□□□□□ -2.38
SNORD28B-201ENST00000390993 IGKV3-7A0A075B6H7 116 aa0.2□□□□□ -2.38
SNORD28B-201ENST00000390993 IGKV3D-7A0A0C4DH55 119 aa0.2□□□□□ -2.38
SNORD28B-201ENST00000390993 IGKV3OR2-268A0A0C4DH90 116 aa0.2□□□□□ -2.38
SNORD28B-201ENST00000390993 LOC389332A0A1B0GUA5 103 aa0.2□□□□□ -2.38
SNORD28B-201ENST00000390993 SLC5A10A0PJK1 596 aa0.2□□□□□ -2.38
SNORD28B-201ENST00000390993 GOLGA8OA6NCC3 632 aa0.2□□□□□ -2.38
SNORD28B-201ENST00000390993 ARRDC5A6NEK1 342 aa0.2□□□□□ -2.38
SNORD28B-201ENST00000390993 OR5H14A6NHG9 310 aa0.2□□□□□ -2.38
SNORD28B-201ENST00000390993 F8W036 122 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms