RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 YBX2Q9Y2T7 364 aaKnown RBP12.58□□□□□ -0.4
RTF1-201ENST00000389629 CACNA1DQ01668 2161 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 ARGFXA6NJG6 315 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 H0Y8G0 127 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 MYF5P13349 255 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 GABRG2P18507 467 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 P2RY1P47900 373 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 ZNF154Q13106 437 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 POC1BQ8TC44 478 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 OXGR1Q96P68 337 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 PCOLCE2Q9UKZ9 415 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 MMP17Q9ULZ9 603 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 FUT9Q9Y231 359 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 OPN1MWP04001 364 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 OPN1MW2P0DN77 364 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 OPN1MW3P0DN78 364 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 OTX2P32243 289 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 GABRA4P48169 554 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 SLC26A10Q8NG04 563 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 PTPMT1Q8WUK0 201 aaPredicted RBP12.57□□□□□ -0.4
RTF1-201ENST00000389629 ASB10Q8WXI3 467 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 SH3BGRL3Q9H299 93 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 TPRP12270 2363 aaKnown RBP12.57□□□□□ -0.4
RTF1-201ENST00000389629 C3orf85A0A1B0GTC6 90 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 MAP1LC3B2A6NCE7 125 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 ZNF729A6NN14 1252 aaPredicted RBP12.57□□□□□ -0.4
RTF1-201ENST00000389629 MASP2O00187 686 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 PGA4P0DJD7 388 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 PGA5P0DJD9 388 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 RAB4AP20338 218 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 DCDP81605 110 aaKnown RBP12.57□□□□□ -0.4
RTF1-201ENST00000389629 SHBQ15464 509 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 OR8G1Q15617 311 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 MAML2Q8IZL2 1156 aaPredicted RBP12.57□□□□□ -0.4
RTF1-201ENST00000389629 MAP1LC3BQ9GZQ8 125 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 RNF150Q9ULK6 438 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 ZNF92Q03936 586 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 TGIF2LXQ8IUE1 241 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 PITPNC1Q9UKF7 332 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 C17orf51A8MQB3 221 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 NPIPB9F8W1W9 429 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 LYPD3O95274 346 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 HOXC4P09017 264 aaPredicted RBP12.57□□□□□ -0.4
RTF1-201ENST00000389629 VAMP3Q15836 100 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 SLC25A43Q8WUT9 341 aaPredicted RBP12.57□□□□□ -0.4
RTF1-201ENST00000389629 DYRK2Q92630 601 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 MVB12AQ96EY5 273 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 ABI3Q9P2A4 366 aa12.57□□□□□ -0.4
RTF1-201ENST00000389629 MCTS1Q9ULC4 181 aaKnown RBP12.57□□□□□ -0.4
RTF1-201ENST00000389629 ABHD16AO95870 558 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 PCBD1P61457 104 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 ERVK-16P61578 105 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 FBXO46Q6PJ61 603 aaPredicted RBP12.56□□□□□ -0.4
RTF1-201ENST00000389629 PP6455Q8WZ26 134 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 MRGPRX4Q96LA9 322 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 LANCL2Q9NS86 450 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 ZNF586Q9NXT0 402 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 PLXNA3P51805 1871 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 NLRC5Q86WI3 1866 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 TERTO14746 1132 aaKnown RBP12.56□□□□□ -0.4
RTF1-201ENST00000389629 TMEM92Q6UXU6 159 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.56□□□□□ -0.4
RTF1-201ENST00000389629 OR4A4PQ8NGN8 299 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 BSCL2Q96G97 398 aaPredicted RBP12.56□□□□□ -0.4
RTF1-201ENST00000389629 TTRP02766 147 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 MST1P26927 711 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 CASP6P55212 293 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 SUMO1P63165 101 aaKnown RBP12.56□□□□□ -0.4
RTF1-201ENST00000389629 HIST1H3AP68431 136 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 TIPARPQ7Z3E1 657 aaKnown RBP12.56□□□□□ -0.4
RTF1-201ENST00000389629 DMBX1Q8NFW5 382 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 SLC2A9Q9NRM0 540 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 ZNF737O75373 536 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 IL11P20809 199 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 MMP16P51512 607 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 BSXQ3C1V8 233 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 LIAT1Q6ZQX7 453 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 CRIPAKQ8N1N5 446 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 ZNF808Q8N4W9 903 aaPredicted RBP12.56□□□□□ -0.4
RTF1-201ENST00000389629 IER2Q9BTL4 223 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 SLC25A22Q9H936 323 aa12.56□□□□□ -0.4
RTF1-201ENST00000389629 A0A1W2PPC4 97 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 CLEC18AA5D8T8 446 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 NKX2-6A6NCS4 301 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 F6UZH7 168 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 NDUFA2O43678 99 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 FSTP19883 344 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 THBS4P35443 961 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 CLEC18CQ8NCF0 446 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 RNF133Q8WVZ7 376 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 AQP3Q92482 292 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 ELOVL1Q9BW60 279 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 ACTR3CQ9C0K3 210 aaPredicted RBP12.55□□□□□ -0.4
RTF1-201ENST00000389629 CHST1O43916 411 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 SPINK4O60575 86 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 GAPDHP04406 335 aaKnown RBP12.55□□□□□ -0.4
RTF1-201ENST00000389629 KIR2DL1P43626 348 aaPredicted RBP12.55□□□□□ -0.4
RTF1-201ENST00000389629 ACOT6Q3I5F7 207 aaPredicted RBP12.55□□□□□ -0.4
RTF1-201ENST00000389629 PTX4Q96A99 478 aa12.55□□□□□ -0.4
RTF1-201ENST00000389629 LPAR5Q9H1C0 372 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms