RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 CA7P43166 264 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 IDH3GP51553 393 aaPredicted RBP10.72□□□□□ -0.69
CIITA-202ENST00000381835 IL13RA1P78552 427 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 MRPL49Q13405 166 aaKnown RBP10.72□□□□□ -0.69
CIITA-202ENST00000381835 PPP1R1AQ13522 171 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 UQCC3Q6UW78 93 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 FGGYQ96C11 551 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 LYZL4Q96KX0 146 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 TSNAXQ99598 290 aaKnown RBP10.72□□□□□ -0.69
CIITA-202ENST00000381835 PCDHB10Q9UN67 800 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 MEMO1Q9Y316 297 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 A0A0U1RQV5 110 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 C9orf170A2RU37 121 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 A8MXE2 369 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 SERPINA5P05154 406 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 S100A6P06703 90 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 ZBTB25P24278 435 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 GNALP38405 381 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 PRSS12P56730 875 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 TMEM211Q6ICI0 200 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 ALKBH2Q6NS38 261 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 UNQ6126/PRO20091Q6UXV3 157 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 MYPOPQ86VE0 399 aaPredicted RBP10.72□□□□□ -0.69
CIITA-202ENST00000381835 WDR31Q8NA23 367 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 SLC30A7Q8NEW0 376 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 OR1S2Q8NGQ3 325 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 SGK3Q96BR1 496 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 POM121L2Q96KW2 1035 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 PHB2Q99623 299 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 CST11Q9H112 138 aa10.72□□□□□ -0.69
CIITA-202ENST00000381835 ZFYVE26Q68DK2 2539 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 METTL21EPA6NDL7 271 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 H7C2Y5 167 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 CCL21O00585 134 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 LDLRAD4O15165 306 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 BDKRB2P30411 391 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 FAM27E3Q08E93 113 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 SHEQ5VZ18 495 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 KCTD9Q7L273 389 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 DOK3Q7L591 496 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 MRGPRGQ86SM5 289 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 TRAPPC6BQ86SZ2 158 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 FJX1Q86VR8 437 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 CHST4Q8NCG5 386 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 CASTOR1Q8WTX7 329 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 MITD1Q8WV92 249 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 ADAT3Q96EY9 351 aaPredicted RBP10.71□□□□□ -0.69
CIITA-202ENST00000381835 OR51B6Q9H340 312 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 SLC2A8Q9NY64 477 aa10.71□□□□□ -0.69
CIITA-202ENST00000381835 RAB19A4D1S5 217 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 OR5H1A6NKK0 313 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 ZNF14P17017 642 aaPredicted RBP10.7□□□□□ -0.7
CIITA-202ENST00000381835 HLA-GP17693 338 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 CCL1P22362 96 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 VAMP1P23763 118 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 AKR1C2P52895 323 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 AKR1C1Q04828 323 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 RAB12Q6IQ22 244 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 C17orf78Q8N4C9 275 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 PAQR4Q8N4S7 273 aaPredicted RBP10.7□□□□□ -0.7
CIITA-202ENST00000381835 OR4D6Q8NGJ1 314 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 S100PBPQ96BU1 408 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 REEP6Q96HR9 211 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 BOD1Q96IK1 185 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 C1QTNF5Q9BXJ0 243 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 IFT22Q9H7X7 185 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 ADGRG4Q8IZF6 3080 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 CADP27708 2225 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 TMEM218A2RU14 115 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 GPR31O00270 319 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 IGLV3-1P01715 115 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 CD37P11049 281 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 ZNF20P17024 532 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 AKR1C4P17516 323 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 C1orf100Q5SVJ3 147 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 OR52W1Q6IF63 320 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 SVBPQ8N300 66 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 GVQW1Q8N7I0 195 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 ZDHHC22Q8N966 263 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 AQP3Q92482 292 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 PTX4Q96A99 478 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 MBD2Q9UBB5 411 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 HIVEP3Q5T1R4 2406 aa10.7□□□□□ -0.7
CIITA-202ENST00000381835 C13orf42A0A1B0GVH6 325 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 C5orf51A6NDU8 294 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 KCNAB3O43448 404 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 DHRS3O75911 302 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 NGFP01138 241 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 CBR1P16152 277 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 RAB6AP20340 208 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 ZNF92Q03936 586 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 TBC1D28Q2M2D7 210 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 ZNF260Q3ZCT1 412 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 TMEM88Q6PEY1 159 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 HAGHLQ6PII5 290 aaPredicted RBP10.69□□□□□ -0.7
CIITA-202ENST00000381835 ZNF101Q8IZC7 436 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 NKAIN3Q8N8D7 197 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 OR14K1Q8NGZ2 314 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 MRGPRFQ96AM1 343 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 FOXRED1Q96CU9 486 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms