RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 DMRTA2Q96SC8 542 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 TGIF2Q9GZN2 237 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 NAA60Q9H7X0 242 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 ADGRL4Q9HBW9 690 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 TRAPPC1Q9Y5R8 145 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 GFRA3O60609 400 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 CTSSP25774 331 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 OR1D4P47884 311 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 PCP4P48539 62 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 FUT7Q11130 342 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 MFSD12Q6NUT3 480 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 CBLN2Q8IUK8 224 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 TEAD3Q99594 435 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 AGMATQ9BSE5 352 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 TXNIPQ9H3M7 391 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 ZNF160Q9HCG1 818 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 KCNE1BA0A087WTH5 132 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 LOC102723971A0A1B0GUV8 181 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 GJB3O75712 270 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 RAD52P43351 418 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 ST3GAL2Q16842 350 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 HSD11B1LQ7Z5J1 315 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 MCHR2Q969V1 340 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 TMEM147Q9BVK8 224 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 R3HDMLQ9H3Y0 253 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 TMEM38BQ9NVV0 291 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 TUBD1Q9UJT1 453 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 YARS2Q9Y2Z4 477 aaKnown RBP4.37□□□□□ -1.71
PTPRD-203ENST00000381196 TLN1Q9Y490 2541 aaKnown RBP4.37□□□□□ -1.71
PTPRD-203ENST00000381196 A0A0B4J2E0 115 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 A0A1B0GX12 115 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 C1QTNF9BB2RNN3 333 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 TNFRSF10CO14798 259 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 C1orf105O95561 183 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 CLDN1O95832 211 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 CH25HO95992 272 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 ISG15P05161 165 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 FCER1GP30273 86 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 PSMB10P40306 273 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 OR1E2P47887 323 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 RHOBP62745 196 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 TRIP6Q15654 476 aaKnown RBP4.37□□□□□ -1.71
PTPRD-203ENST00000381196 NUFIP2Q7Z417 695 aaKnown RBP4.37□□□□□ -1.71
PTPRD-203ENST00000381196 NFAM1Q8NET5 270 aaPredicted RBP4.37□□□□□ -1.71
PTPRD-203ENST00000381196 OR1P1Q8NH06 330 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 CHST8Q9H2A9 424 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 MYOFQ9NZM1 2061 aa4.37□□□□□ -1.71
PTPRD-203ENST00000381196 SLC5A10A0PJK1 596 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 ALOX12BO75342 701 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 TYMSP04818 313 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 PTNP21246 168 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 SOX2P48431 317 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 CNN1P51911 297 aaKnown RBP4.36□□□□□ -1.71
PTPRD-203ENST00000381196 UCP3P55916 312 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 PMS2P11Q13670 270 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 ZNF506Q5JVG8 444 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 AAED1Q7RTV5 226 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 OR2M3Q8NG83 312 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 OR4A16Q8NH70 328 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 ZNF230Q9UIE0 474 aaPredicted RBP4.36□□□□□ -1.71
PTPRD-203ENST00000381196 KIAA1671Q9BY89 1806 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 PLXNB1O43157 2135 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 FREM1Q5H8C1 2179 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 A0A1B0GX78 115 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 SLC25A17O43808 307 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 MAS1P04201 325 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 GNB2P62879 340 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 FMODQ06828 376 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 PLPPR1Q8TBJ4 325 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 NPVFQ9HCQ7 196 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 POLDIP2Q9Y2S7 368 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 C9orf170A2RU37 121 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 ANKUB1A6NFN9 424 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 VDAC1P21796 283 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 ZBTB25P24278 435 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 ARNTP27540 789 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 POLR2IP36954 125 aaKnown RBP4.36□□□□□ -1.71
PTPRD-203ENST00000381196 GPM6AP51674 278 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 SMN1Q16637 294 aaKnown RBP4.36□□□□□ -1.71
PTPRD-203ENST00000381196 GLYATL3Q5SZD4 288 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 PIP5KL1Q5T9C9 394 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 C1orf210Q8IVY1 113 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 MIEN1Q9BRT3 115 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 RHNO1Q9BSD3 238 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 C20orf27Q9GZN8 174 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.36□□□□□ -1.71
PTPRD-203ENST00000381196 GAB2Q9UQC2 676 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 TRBV24-1A0A075B6N3 115 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 C7orf77A4D0Y5 90 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 HMGN4O00479 90 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 EIF3GO75821 320 aaKnown RBP eCLIP4.36□□□□□ -1.71
PTPRD-203ENST00000381196 PNLIPRP2P54317 469 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 ZNF90Q03938 601 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 TMEM207Q6UWW9 146 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 LYPD8Q6UX82 237 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 OCIAD1Q9NX40 245 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 ZFP30Q9Y2G7 519 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 KIAA1549LQ6ZVL6 1849 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 ZNF264O43296 627 aa4.36□□□□□ -1.71
PTPRD-203ENST00000381196 ANKRD34CP0C6C1 535 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms